RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 LINC00303Q3SY05 128 aa14.36□□□□□ -0.11
IRF3-219ENST00000597636 FAM199XQ6PEV8 388 aaPredicted RBP14.36□□□□□ -0.11
IRF3-219ENST00000597636 EID2Q8N6I1 236 aa14.36□□□□□ -0.11
IRF3-219ENST00000597636 PRSS27Q9BQR3 290 aa14.36□□□□□ -0.11
IRF3-219ENST00000597636 UTP23Q9BRU9 249 aaKnown RBP14.36□□□□□ -0.11
IRF3-219ENST00000597636 PITHD1Q9GZP4 211 aaPredicted RBP14.36□□□□□ -0.11
IRF3-219ENST00000597636 ARL6Q9H0F7 186 aa14.36□□□□□ -0.11
IRF3-219ENST00000597636 ZNF223Q9UK11 482 aaPredicted RBP14.36□□□□□ -0.11
IRF3-219ENST00000597636 COPS3Q9UNS2 423 aa14.36□□□□□ -0.11
IRF3-219ENST00000597636 A0A1W2PR48 441 aa14.36□□□□□ -0.11
IRF3-219ENST00000597636 LRIT2A6NDA9 550 aa14.36□□□□□ -0.11
IRF3-219ENST00000597636 D6RAR5 112 aa14.36□□□□□ -0.11
IRF3-219ENST00000597636 CLUP10909 449 aa14.36□□□□□ -0.11
IRF3-219ENST00000597636 MYOGP15173 224 aa14.36□□□□□ -0.11
IRF3-219ENST00000597636 PDX1P52945 283 aa14.36□□□□□ -0.11
IRF3-219ENST00000597636 ZC3H14Q6PJT7 736 aaKnown RBP14.36□□□□□ -0.11
IRF3-219ENST00000597636 C17orf107Q6ZR85 190 aa14.36□□□□□ -0.11
IRF3-219ENST00000597636 FCAMRQ8WWV6 532 aa14.36□□□□□ -0.11
IRF3-219ENST00000597636 IRAK3Q9Y616 596 aa14.36□□□□□ -0.11
IRF3-219ENST00000597636 DNASE2O00115 360 aaPredicted RBP14.35□□□□□ -0.11
IRF3-219ENST00000597636 SELENOFO60613 162 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 APOC3P02656 99 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 MC3RP41968 323 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 GPR1P46091 355 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 GDI2P50395 445 aaKnown RBP14.35□□□□□ -0.11
IRF3-219ENST00000597636 COL9A2Q14055 689 aaPredicted RBP14.35□□□□□ -0.11
IRF3-219ENST00000597636 GK2Q14410 553 aaPredicted RBP14.35□□□□□ -0.11
IRF3-219ENST00000597636 OLFML2AQ68BL7 652 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 THSD4Q6ZMP0 1018 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 CLRN3Q8NCR9 226 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 SP7Q8TDD2 431 aaPredicted RBP14.35□□□□□ -0.11
IRF3-219ENST00000597636 CXorf40AQ8TE69 158 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 NPAS1Q99742 590 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 PCBD2Q9H0N5 130 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 MED11Q9P086 117 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 ZNF443Q9Y2A4 671 aaPredicted RBP14.35□□□□□ -0.11
IRF3-219ENST00000597636 ATG4BQ9Y4P1 393 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 ANKRD20A5PA0PJZ0 165 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 ANKRD61A6NGH8 418 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 CHURC1-FNTBB4DL54 471 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 SDC3O75056 442 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 CLEC3AO75596 197 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 LDOC1O95751 146 aaPredicted RBP14.35□□□□□ -0.11
IRF3-219ENST00000597636 CSNK2A2P19784 350 aaPredicted RBP14.35□□□□□ -0.11
IRF3-219ENST00000597636 SLC2A5P22732 501 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 MECP2P51608 486 aaKnown RBP14.35□□□□□ -0.11
IRF3-219ENST00000597636 RPS11P62280 158 aaKnown RBP eCLIP14.35□□□□□ -0.11
IRF3-219ENST00000597636 ACTC1P68032 377 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 ACTA1P68133 377 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 PUS10Q3MIT2 529 aaKnown RBP14.35□□□□□ -0.11
IRF3-219ENST00000597636 TP53I3Q53FA7 332 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 CLVS2Q5SYC1 327 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 FCRLBQ6BAA4 426 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 GSG1LQ6UXU4 331 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 NUDT18Q6ZVK8 323 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 PARS2Q7L3T8 475 aaKnown RBP14.35□□□□□ -0.11
IRF3-219ENST00000597636 TTLQ8NG68 377 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 OR5M9Q8NGP3 310 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 PNPLA2Q96AD5 504 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 SMIM19Q96E16 107 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 MRPS24Q96EL2 167 aaKnown RBP14.35□□□□□ -0.11
IRF3-219ENST00000597636 PEX11GQ96HA9 241 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 MRGPRX3Q96LB0 322 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 ZNF558Q96NG5 402 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 KLHL31Q9H511 634 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 NRIP3Q9NQ35 241 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 C20orf141Q9NUB4 165 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 FBXL4Q9UKA2 621 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 GPR34Q9UPC5 381 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 SLC35A3Q9Y2D2 325 aa14.35□□□□□ -0.11
IRF3-219ENST00000597636 GRXCR1A8MXD5 290 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 RCBTB2O95199 551 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 HOXB3P14651 431 aaPredicted RBP14.34□□□□□ -0.11
IRF3-219ENST00000597636 DLX5P56178 289 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 B2MP61769 119 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 CSNK1G2P78368 415 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 CDK5R1Q15078 307 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 PFN4Q8NHR9 129 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 SLC25A38Q96DW6 304 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 SLC35A4Q96G79 324 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 OR14A2Q96R54 314 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 HAO2Q9NYQ3 351 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 OPN4Q9UHM6 478 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 PRELID3BQ9Y3B1 194 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 PCYT1BQ9Y5K3 369 aaPredicted RBP14.34□□□□□ -0.11
IRF3-219ENST00000597636 A0A1W2PPV9 198 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 PCDH8O95206 1070 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 ZNF136P52737 540 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 ERVK-21P61565 698 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 FAAP20Q6NZ36 180 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 WDR88Q6ZMY6 472 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 FRRS1Q6ZNA5 592 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 CYB561A3Q8NBI2 242 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 SLC2A12Q8TD20 617 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 OR1F2PQ96R84 312 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 SLC38A3Q99624 504 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 SLC46A2Q9BY10 475 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 TTTY10Q9BZA0 68 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 CERS4Q9HA82 394 aa14.34□□□□□ -0.11
IRF3-219ENST00000597636 EXOSC3Q9NQT5 275 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms