RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 C6orf10Q5SRN2 563 aa9.35□□□□□ -0.91
CCDC9-203ENST00000596938 SFRP5Q5T4F7 317 aa9.35□□□□□ -0.91
CCDC9-203ENST00000596938 MRPL2Q5T653 305 aaKnown RBP9.35□□□□□ -0.91
CCDC9-203ENST00000596938 PRAMEF8Q5VWM4 474 aa9.35□□□□□ -0.91
CCDC9-203ENST00000596938 PRAMEF7Q5VXH5 474 aa9.35□□□□□ -0.91
CCDC9-203ENST00000596938 HMGN2P46Q86SG4 172 aa9.35□□□□□ -0.91
CCDC9-203ENST00000596938 FUNDC1Q8IVP5 155 aa9.35□□□□□ -0.91
CCDC9-203ENST00000596938 OR52P1PQ8NH57 321 aa9.35□□□□□ -0.91
CCDC9-203ENST00000596938 WDR60Q8WVS4 1066 aa9.35□□□□□ -0.91
CCDC9-203ENST00000596938 DYDC1Q8WWB3 177 aa9.35□□□□□ -0.91
CCDC9-203ENST00000596938 CKAP2Q8WWK9 683 aa9.35□□□□□ -0.91
CCDC9-203ENST00000596938 STON2Q8WXE9 905 aa9.35□□□□□ -0.91
CCDC9-203ENST00000596938 PIK3IP1Q96FE7 263 aa9.35□□□□□ -0.91
CCDC9-203ENST00000596938 EBF4Q9BQW3 602 aa9.35□□□□□ -0.91
CCDC9-203ENST00000596938 ADAM19Q9H013 955 aa9.35□□□□□ -0.91
CCDC9-203ENST00000596938 BCL2L10Q9HD36 194 aa9.35□□□□□ -0.91
CCDC9-203ENST00000596938 SLC52A3Q9NQ40 469 aa9.35□□□□□ -0.91
CCDC9-203ENST00000596938 OSGIN1Q9UJX0 560 aa9.35□□□□□ -0.91
CCDC9-203ENST00000596938 ZNF232Q9UNY5 417 aa9.35□□□□□ -0.91
CCDC9-203ENST00000596938 GMEB1Q9Y692 573 aa9.35□□□□□ -0.91
CCDC9-203ENST00000596938 VPS13CQ709C8 3753 aa9.35□□□□□ -0.91
CCDC9-203ENST00000596938 A0A096LPI6 279 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 TMED7-TICAM2A0A0A6YYA0 188 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 IGHV3-15A0A0B4J1V0 119 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 CDHR4A6H8M9 788 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 TMEM247A6NEH6 219 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 ZNF814B7Z6K7 855 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 AP3D1O14617 1153 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 EIF1BO60739 113 aaKnown RBP9.34□□□□□ -0.91
CCDC9-203ENST00000596938 FESP07332 822 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 UQCRBP14927 111 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 HOXB9P17482 250 aaPredicted RBP9.34□□□□□ -0.91
CCDC9-203ENST00000596938 LOXP28300 417 aaPredicted RBP9.34□□□□□ -0.91
CCDC9-203ENST00000596938 TACR3P29371 465 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 ATP4BP51164 291 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 NR1H2P55055 460 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 H3F3AP84243 136 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 EPS8Q12929 822 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 FADDQ13158 208 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 ITGADQ13349 1161 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 LARS2Q15031 903 aaKnown RBP9.34□□□□□ -0.91
CCDC9-203ENST00000596938 ACKR1Q16570 336 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 GTDC1Q4AE62 458 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 LIN52Q52LA3 116 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 BEX5Q5H9J7 111 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 LRIF1Q5T3J3 769 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 SLC2A7Q6PXP3 512 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 DNAJC14Q6Y2X3 702 aaPredicted RBP9.34□□□□□ -0.91
CCDC9-203ENST00000596938 Q6ZT83 130 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 GALNT5Q7Z7M9 940 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 CXorf67Q86X51 503 aaPredicted RBP9.34□□□□□ -0.91
CCDC9-203ENST00000596938 TGIF2LYQ8IUE0 185 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 HSD17B8Q92506 261 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 SPDL1Q96EA4 605 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 ZHX1-C8orf76Q96EF9 292 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 AURKBQ96GD4 344 aaPredicted RBP9.34□□□□□ -0.91
CCDC9-203ENST00000596938 ZC3HAV1LQ96H79 300 aaKnown RBP9.34□□□□□ -0.91
CCDC9-203ENST00000596938 ARL5BQ96KC2 179 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 MAGEB18Q96M61 343 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 PIP5K1AQ99755 562 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 TMUB1Q9BVT8 246 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 ACTR6Q9GZN1 396 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 RAD21L1Q9H4I0 556 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 ARMC7Q9H6L4 198 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 A4GALTQ9NPC4 353 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 RLIMQ9NVW2 624 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 BEX4Q9NWD9 120 aaPredicted RBP9.34□□□□□ -0.91
CCDC9-203ENST00000596938 TMEM181Q9P2C4 612 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 IFT52Q9Y366 437 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 TMED7Q9Y3B3 224 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 ITPR3Q14573 2671 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 F8P00451 2351 aa9.34□□□□□ -0.91
CCDC9-203ENST00000596938 ADAP00813 363 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 BCHEP06276 602 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 KLK2P20151 261 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 FPR1P21462 350 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 PPIBP23284 216 aaKnown RBP9.33□□□□□ -0.92
CCDC9-203ENST00000596938 HOXC12P31275 282 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 ACAA2P42765 397 aaKnown RBP9.33□□□□□ -0.92
CCDC9-203ENST00000596938 SLC16A1P53985 500 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 RNF220Q5VTB9 566 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 ABLIM2Q6H8Q1 611 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 VRK2Q86Y07 508 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 CLIP4Q8N3C7 705 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 KISS1RQ969F8 398 aaPredicted RBP9.33□□□□□ -0.92
CCDC9-203ENST00000596938 PIGTQ969N2 578 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 SLC35B4Q969S0 331 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 ZNF775Q96BV0 537 aaPredicted RBP9.33□□□□□ -0.92
CCDC9-203ENST00000596938 DDIT4LQ96D03 193 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 TMEM19Q96HH6 336 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 HS3ST6Q96QI5 342 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 TMEM204Q9BSN7 226 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 SPATA9Q9BWV2 254 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 POTEKPQ9BYX7 375 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 OR11A1Q9GZK7 315 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 RABEP2Q9H5N1 569 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 SLC25A37Q9NYZ2 338 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 CCDC167Q9P0B6 97 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 EMC3Q9P0I2 261 aa9.33□□□□□ -0.92
CCDC9-203ENST00000596938 SLAMF8Q9P0V8 285 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms