RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 OSGIN1Q9UJX0 560 aa15.48■□□□□ 0.07
SHKBP1-212ENST00000596163 TMED7Q9Y3B3 224 aa15.48■□□□□ 0.07
SHKBP1-212ENST00000596163 PCNX3Q9H6A9 2034 aa15.48■□□□□ 0.07
SHKBP1-212ENST00000596163 MAST4O15021 2626 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 A0A1W2PNR3 127 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 SULT2B1O00204 365 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 MSTNO14793 375 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 TNFSF13O75888 250 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 PRKD3O94806 890 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 IGFBP2P18065 325 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 ENPP1P22413 925 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 AQP1P29972 269 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 PCGF2P35227 344 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 KIR2DL2P43627 348 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 CPA2P48052 419 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 VMACQ2NL98 169 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 RABL3Q5HYI8 236 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 FCRLAQ7L513 359 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 DMRTC2Q8IXT2 367 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 ZZZ3Q8IYH5 903 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 POU5F2Q8N7G0 328 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 ACBD4Q8NC06 268 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 SLC26A7Q8TE54 656 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 RASSF5Q8WWW0 418 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 ROBO4Q8WZ75 1007 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 RCN3Q96D15 328 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 STARD4Q96DR4 205 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 HOPXQ9BPY8 73 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 SLC39A3Q9BRY0 314 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 COQ10BQ9H8M1 238 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 GP6Q9HCN6 339 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 PROCRQ9UNN8 238 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 ARL2BPQ9Y2Y0 163 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 CHST2Q9Y4C5 530 aa15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 UTP20O75691 2785 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-212ENST00000596163 M0QX08 132 aa15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 FXYD1O00168 92 aa15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 NDUFAB1O14561 156 aa15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 AIM2O14862 343 aa15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 DNPH1O43598 174 aa15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 SS18L1O75177 396 aaPredicted RBP15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 SMNDC1O75940 238 aaKnown RBP eCLIP15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 MFN2O95140 757 aa15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 CD8BP10966 210 aa15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 CCNA2P20248 432 aa15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 PRDX6P30041 224 aa15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 DIO1P49895 249 aa15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 PCBP3P57721 371 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 SIRPAP78324 504 aa15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 VEZF1Q14119 521 aa15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 TMEM201Q5SNT2 666 aa15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 PIGWQ7Z7B1 504 aa15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 LUZP2Q86TE4 346 aa15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 OR6K3Q8NGY3 331 aa15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 RBM24Q9BX46 236 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 SRXN1Q9BYN0 137 aa15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 TRIM2Q9C040 744 aa15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 MYLK2Q9H1R3 596 aa15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 FANCFQ9NPI8 374 aa15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 TRAPPC4Q9Y296 219 aa15.46■□□□□ 0.07
SHKBP1-212ENST00000596163 ARHGAP21Q5T5U3 1957 aa15.45■□□□□ 0.06
SHKBP1-212ENST00000596163 A8MXE2 369 aa15.45■□□□□ 0.06
SHKBP1-212ENST00000596163 PMS2P2O95744 297 aa15.45■□□□□ 0.06
SHKBP1-212ENST00000596163 IFNA14P01570 189 aa15.45■□□□□ 0.06
SHKBP1-212ENST00000596163 C8BP07358 591 aa15.45■□□□□ 0.06
SHKBP1-212ENST00000596163 PRG2P13727 222 aa15.45■□□□□ 0.06
SHKBP1-212ENST00000596163 GZMMP51124 257 aa15.45■□□□□ 0.06
SHKBP1-212ENST00000596163 NCALDP61601 193 aa15.45■□□□□ 0.06
SHKBP1-212ENST00000596163 GUSBP1Q15486 140 aa15.45■□□□□ 0.06
SHKBP1-212ENST00000596163 BTLAQ7Z6A9 289 aa15.45■□□□□ 0.06
SHKBP1-212ENST00000596163 CALHM3Q86XJ0 350 aa15.45■□□□□ 0.06
SHKBP1-212ENST00000596163 OR52E4Q8NGH9 312 aa15.45■□□□□ 0.06
SHKBP1-212ENST00000596163 RNF128Q8TEB7 428 aa15.45■□□□□ 0.06
SHKBP1-212ENST00000596163 ZNF559Q9BR84 538 aa15.45■□□□□ 0.06
SHKBP1-212ENST00000596163 POTEKPQ9BYX7 375 aa15.45■□□□□ 0.06
SHKBP1-212ENST00000596163 PIF1Q9H611 641 aa15.45■□□□□ 0.06
SHKBP1-212ENST00000596163 TMEM27Q9HBJ8 222 aa15.45■□□□□ 0.06
SHKBP1-212ENST00000596163 SELENONQ9NZV5 590 aa15.45■□□□□ 0.06
SHKBP1-212ENST00000596163 TMEM181Q9P2C4 612 aa15.45■□□□□ 0.06
SHKBP1-212ENST00000596163 KLHL9Q9P2J3 617 aa15.45■□□□□ 0.06
SHKBP1-212ENST00000596163 KCNN3Q9UGI6 736 aa15.45■□□□□ 0.06
SHKBP1-212ENST00000596163 TMEM72A0PK05 275 aa15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 A8MVM7 634 aa15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 EIF1BO60739 113 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 DCTN3O75935 186 aa15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 SSTR2P30874 369 aa15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 KIR2DL3P43628 341 aa15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 PCYT1AP49585 367 aa15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 RGS8P57771 180 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 OR2B6P58173 313 aa15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 SLC35A1P78382 337 aa15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 SORDQ00796 357 aa15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 MYBPHQ13203 477 aa15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 VWA1Q6PCB0 445 aa15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 HACD2Q6Y1H2 254 aa15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 CCDC80Q76M96 950 aa15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 GDF7Q7Z4P5 450 aa15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 STK32CQ86UX6 486 aa15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 RANBP3LQ86VV4 465 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-212ENST00000596163 TREML1Q86YW5 311 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms