RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 GJE1A6NN92 205 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 BBIP1A8MTZ0 92 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 TMEM229AB2RXF0 380 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 ZNF814B7Z6K7 855 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 M0QX08 132 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 SMAD9O15198 467 aaKnown RBP9.95□□□□□ -0.82
VRK3-210ENST00000596121 SLC22A2O15244 555 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 RAMP1O60894 148 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 SS18L1O75177 396 aaPredicted RBP9.95□□□□□ -0.82
VRK3-210ENST00000596121 SYNGR4O95473 234 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 OPN1SWP03999 348 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 IMPDH2P12268 514 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 COX4I1P13073 169 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 PRKAR1BP31321 381 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 DIO1P49895 249 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 POLR2HP52434 150 aaKnown RBP9.95□□□□□ -0.82
VRK3-210ENST00000596121 RAC3P60763 192 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 BNIP2Q12982 314 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 MYBPHQ13203 477 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 CYP51A1Q16850 503 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 SYT14P1Q58G82 188 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 OR2A2Q6IF42 318 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 C3orf33Q6P1S2 294 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 TMPPEQ6ZT21 453 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 PIGWQ7Z7B1 504 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 ZNF440Q8IYI8 595 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 CADM2Q8N3J6 435 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 ZNF610Q8N9Z0 462 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 SMYD1Q8NB12 490 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 C11orf65Q8NCR3 313 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 GPR32P1Q8NGA4 272 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 OR8J3Q8NGG0 315 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 RNF128Q8TEB7 428 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 TAMM41Q96BW9 452 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 GPATCH1Q9BRR8 931 aaKnown RBP9.95□□□□□ -0.82
VRK3-210ENST00000596121 PRRG4Q9BZD6 226 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 SERINC1Q9NRX5 453 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 CMTM6Q9NX76 183 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 GALNT8Q9NY28 637 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 CHRNA9Q9UGM1 479 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 MCTS1Q9ULC4 181 aaKnown RBP9.95□□□□□ -0.82
VRK3-210ENST00000596121 MPDZO75970 2070 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 LRBAP50851 2863 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 TACC2O95359 2948 aa9.95□□□□□ -0.82
VRK3-210ENST00000596121 CCT8L1PA6NM43 557 aa9.94□□□□□ -0.82
VRK3-210ENST00000596121 CCDC22O60826 627 aa9.94□□□□□ -0.82
VRK3-210ENST00000596121 SMNDC1O75940 238 aaKnown RBP eCLIP9.94□□□□□ -0.82
VRK3-210ENST00000596121 NPPAP01160 153 aa9.94□□□□□ -0.82
VRK3-210ENST00000596121 FCGR2AP12318 317 aa9.94□□□□□ -0.82
VRK3-210ENST00000596121 CD247P20963 164 aa9.94□□□□□ -0.82
VRK3-210ENST00000596121 EDNRAP25101 427 aa9.94□□□□□ -0.82
VRK3-210ENST00000596121 SLC7A1P30825 629 aa9.94□□□□□ -0.82
VRK3-210ENST00000596121 PCGF2P35227 344 aa9.94□□□□□ -0.82
VRK3-210ENST00000596121 FAM27E3Q08E93 113 aa9.94□□□□□ -0.82
VRK3-210ENST00000596121 RBBP4Q09028 425 aa9.94□□□□□ -0.82
VRK3-210ENST00000596121 MAPRE2Q15555 327 aa9.94□□□□□ -0.82
VRK3-210ENST00000596121 DUSP7Q16829 419 aa9.94□□□□□ -0.82
VRK3-210ENST00000596121 MMEL1Q495T6 779 aa9.94□□□□□ -0.82
VRK3-210ENST00000596121 PDSS1Q5T2R2 415 aa9.94□□□□□ -0.82
VRK3-210ENST00000596121 WBP2NLQ6ICG8 309 aa9.94□□□□□ -0.82
VRK3-210ENST00000596121 C8orf82Q6P1X6 216 aaPredicted RBP9.94□□□□□ -0.82
VRK3-210ENST00000596121 FCRLAQ7L513 359 aa9.94□□□□□ -0.82
VRK3-210ENST00000596121 FAM214BQ7L5A3 538 aa9.94□□□□□ -0.82
VRK3-210ENST00000596121 ZNF550Q7Z398 422 aa9.94□□□□□ -0.82
VRK3-210ENST00000596121 NUFIP2Q7Z417 695 aaKnown RBP9.94□□□□□ -0.82
VRK3-210ENST00000596121 TSPYL5Q86VY4 417 aaPredicted RBP9.94□□□□□ -0.82
VRK3-210ENST00000596121 RBM45Q8IUH3 476 aaKnown RBP9.94□□□□□ -0.82
VRK3-210ENST00000596121 TUSC5Q8IXB3 177 aa9.94□□□□□ -0.82
VRK3-210ENST00000596121 OR4D11Q8NGI4 311 aa9.94□□□□□ -0.82
VRK3-210ENST00000596121 RP9Q8TA86 221 aaKnown RBP9.94□□□□□ -0.82
VRK3-210ENST00000596121 LINC01560Q8TB33 94 aa9.94□□□□□ -0.82
VRK3-210ENST00000596121 CPNE4Q96A23 557 aaPredicted RBP9.94□□□□□ -0.82
VRK3-210ENST00000596121 C3orf49Q96BT1 292 aa9.94□□□□□ -0.82
VRK3-210ENST00000596121 ZNF775Q96BV0 537 aaPredicted RBP9.94□□□□□ -0.82
VRK3-210ENST00000596121 GMPPAQ96IJ6 420 aaPredicted RBP9.94□□□□□ -0.82
VRK3-210ENST00000596121 RBM24Q9BX46 236 aaKnown RBP9.94□□□□□ -0.82
VRK3-210ENST00000596121 PIGMQ9H3S5 423 aa9.94□□□□□ -0.82
VRK3-210ENST00000596121 PAQR5Q9NXK6 330 aaPredicted RBP9.94□□□□□ -0.82
VRK3-210ENST00000596121 CRIM1Q9NZV1 1036 aa9.94□□□□□ -0.82
VRK3-210ENST00000596121 PDZD2O15018 2839 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 SPG11Q96JI7 2443 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 FREM1Q5H8C1 2179 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 SULT2B1O00204 365 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 MSTNO14793 375 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 AIM2O14862 343 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 ZNF208O43345 1280 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 PRKD3O94806 890 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 FESP07332 822 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 TFPIP10646 304 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 CD8BP10966 210 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 AGTR1P30556 359 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 NTF4P34130 210 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 HTR3AP46098 478 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 NPTX1Q15818 432 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 ZSWIM7Q19AV6 140 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 VMACQ2NL98 169 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 C22orf34Q6ZV56 151 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 CPLX4Q7Z7G2 160 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 ATG4DQ86TL0 474 aaPredicted RBP9.93□□□□□ -0.82
VRK3-210ENST00000596121 KRT73Q86Y46 540 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms