RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 MARCOQ9UEW3 520 aaPredicted RBP16.67■□□□□ 0.26
CCDC43-205ENST00000592333 CENPVL1A0A0U1RR11 272 aa16.66■□□□□ 0.26
CCDC43-205ENST00000592333 ZNF716A6NP11 495 aa16.66■□□□□ 0.26
CCDC43-205ENST00000592333 E9PBE3 544 aa16.66■□□□□ 0.26
CCDC43-205ENST00000592333 LYZL6O75951 148 aa16.66■□□□□ 0.26
CCDC43-205ENST00000592333 PTAFRP25105 342 aa16.66■□□□□ 0.26
CCDC43-205ENST00000592333 PCSK6P29122 969 aa16.66■□□□□ 0.26
CCDC43-205ENST00000592333 S100A3P33764 101 aa16.66■□□□□ 0.26
CCDC43-205ENST00000592333 H3F3AP84243 136 aa16.66■□□□□ 0.26
CCDC43-205ENST00000592333 GNA13Q14344 377 aa16.66■□□□□ 0.26
CCDC43-205ENST00000592333 NRF1Q16656 503 aa16.66■□□□□ 0.26
CCDC43-205ENST00000592333 PGGHGQ32M88 737 aa16.66■□□□□ 0.26
CCDC43-205ENST00000592333 TNFAIP8L3Q5GJ75 292 aa16.66■□□□□ 0.26
CCDC43-205ENST00000592333 OR7E24Q6IFN5 339 aa16.66■□□□□ 0.26
CCDC43-205ENST00000592333 DNM1P46Q6ZS02 220 aa16.66■□□□□ 0.26
CCDC43-205ENST00000592333 CLEC4FQ8N1N0 589 aa16.66■□□□□ 0.26
CCDC43-205ENST00000592333 APH1AQ96BI3 265 aa16.66■□□□□ 0.26
CCDC43-205ENST00000592333 PKNOX2Q96KN3 472 aa16.66■□□□□ 0.26
CCDC43-205ENST00000592333 SORT1Q99523 831 aa16.66■□□□□ 0.26
CCDC43-205ENST00000592333 SLC35A5Q9BS91 424 aa16.66■□□□□ 0.26
CCDC43-205ENST00000592333 TRAF4Q9BUZ4 470 aaPredicted RBP16.66■□□□□ 0.26
CCDC43-205ENST00000592333 C20orf27Q9GZN8 174 aa16.66■□□□□ 0.26
CCDC43-205ENST00000592333 CTPS2Q9NRF8 586 aa16.66■□□□□ 0.26
CCDC43-205ENST00000592333 PARPBPQ9NWS1 579 aa16.66■□□□□ 0.26
CCDC43-205ENST00000592333 MALT1Q9UDY8 824 aa16.66■□□□□ 0.26
CCDC43-205ENST00000592333 NOSIPQ9Y314 301 aaKnown RBP16.66■□□□□ 0.26
CCDC43-205ENST00000592333 MAGED1Q9Y5V3 778 aaPredicted RBP16.66■□□□□ 0.26
CCDC43-205ENST00000592333 WDR91A4D1P6 747 aa16.65■□□□□ 0.26
CCDC43-205ENST00000592333 INAFM1C9JVW0 142 aa16.65■□□□□ 0.26
CCDC43-205ENST00000592333 CPSF4O95639 269 aaKnown RBP16.65■□□□□ 0.26
CCDC43-205ENST00000592333 TFPIP10646 304 aa16.65■□□□□ 0.26
CCDC43-205ENST00000592333 CHI3L1P36222 383 aaPredicted RBP16.65■□□□□ 0.26
CCDC43-205ENST00000592333 FUT5Q11128 374 aa16.65■□□□□ 0.26
CCDC43-205ENST00000592333 VEZF1Q14119 521 aa16.65■□□□□ 0.26
CCDC43-205ENST00000592333 STK11Q15831 433 aa16.65■□□□□ 0.26
CCDC43-205ENST00000592333 SPANXN4Q5MJ08 99 aa16.65■□□□□ 0.26
CCDC43-205ENST00000592333 AGAP6Q5VW22 663 aa16.65■□□□□ 0.26
CCDC43-205ENST00000592333 TNFAIP8L2Q6P589 184 aaPredicted RBP16.65■□□□□ 0.26
CCDC43-205ENST00000592333 KLHL17Q6TDP4 642 aa16.65■□□□□ 0.26
CCDC43-205ENST00000592333 TMEM108Q6UXF1 575 aa16.65■□□□□ 0.26
CCDC43-205ENST00000592333 LRRC74BQ6ZQY2 392 aa16.65■□□□□ 0.26
CCDC43-205ENST00000592333 ANKRD46Q86W74 232 aa16.65■□□□□ 0.26
CCDC43-205ENST00000592333 PRIMA1Q86XR5 153 aa16.65■□□□□ 0.26
CCDC43-205ENST00000592333 ADGRG3Q86Y34 549 aa16.65■□□□□ 0.26
CCDC43-205ENST00000592333 KBTBD8Q8NFY9 601 aa16.65■□□□□ 0.26
CCDC43-205ENST00000592333 RAB8BQ92930 207 aa16.65■□□□□ 0.26
CCDC43-205ENST00000592333 SLCO5A1Q9H2Y9 848 aa16.65■□□□□ 0.26
CCDC43-205ENST00000592333 PIF1Q9H611 641 aa16.65■□□□□ 0.26
CCDC43-205ENST00000592333 MTHFD2LQ9H903 347 aaPredicted RBP16.65■□□□□ 0.26
CCDC43-205ENST00000592333 ASB6Q9NWX5 421 aa16.65■□□□□ 0.26
CCDC43-205ENST00000592333 TAS2R16Q9NYV7 291 aa16.65■□□□□ 0.26
CCDC43-205ENST00000592333 TMEM181Q9P2C4 612 aa16.65■□□□□ 0.26
CCDC43-205ENST00000592333 AGAP5A6NIR3 686 aa16.64■□□□□ 0.25
CCDC43-205ENST00000592333 SHISA9B4DS77 424 aa16.64■□□□□ 0.25
CCDC43-205ENST00000592333 HMGN4O00479 90 aa16.64■□□□□ 0.25
CCDC43-205ENST00000592333 MRPL33O75394 65 aaKnown RBP16.64■□□□□ 0.25
CCDC43-205ENST00000592333 UQCRBP14927 111 aa16.64■□□□□ 0.25
CCDC43-205ENST00000592333 STX3Q13277 289 aa16.64■□□□□ 0.25
CCDC43-205ENST00000592333 FAM174BQ3ZCQ3 159 aa16.64■□□□□ 0.25
CCDC43-205ENST00000592333 GPAT3Q53EU6 434 aa16.64■□□□□ 0.25
CCDC43-205ENST00000592333 SPATA19Q7Z5L4 167 aa16.64■□□□□ 0.25
CCDC43-205ENST00000592333 GLB1L3Q8NCI6 653 aaPredicted RBP16.64■□□□□ 0.25
CCDC43-205ENST00000592333 DDIT4LQ96D03 193 aa16.64■□□□□ 0.25
CCDC43-205ENST00000592333 PPP1R36Q96LQ0 422 aa16.64■□□□□ 0.25
CCDC43-205ENST00000592333 MUS81Q96NY9 551 aa16.64■□□□□ 0.25
CCDC43-205ENST00000592333 REG4Q9BYZ8 158 aa16.64■□□□□ 0.25
CCDC43-205ENST00000592333 NUF2Q9BZD4 464 aa16.64■□□□□ 0.25
CCDC43-205ENST00000592333 C9JVG2 144 aa16.63■□□□□ 0.25
CCDC43-205ENST00000592333 TLX2O43763 284 aaPredicted RBP16.63■□□□□ 0.25
CCDC43-205ENST00000592333 CRLF1O75462 422 aa16.63■□□□□ 0.25
CCDC43-205ENST00000592333 CD8AP01732 235 aa16.63■□□□□ 0.25
CCDC43-205ENST00000592333 RYKP34925 604 aa16.63■□□□□ 0.25
CCDC43-205ENST00000592333 SLC1A3P43003 542 aa16.63■□□□□ 0.25
CCDC43-205ENST00000592333 POLR2HP52434 150 aaKnown RBP16.63■□□□□ 0.25
CCDC43-205ENST00000592333 SLC35A1P78382 337 aa16.63■□□□□ 0.25
CCDC43-205ENST00000592333 CHRNEQ04844 493 aa16.63■□□□□ 0.25
CCDC43-205ENST00000592333 GSTA3Q16772 222 aa16.63■□□□□ 0.25
CCDC43-205ENST00000592333 ZNF440Q8IYI8 595 aa16.63■□□□□ 0.25
CCDC43-205ENST00000592333 UBE2J2Q8N2K1 259 aa16.63■□□□□ 0.25
CCDC43-205ENST00000592333 C17orf78Q8N4C9 275 aa16.63■□□□□ 0.25
CCDC43-205ENST00000592333 C1orf162Q8NEQ5 155 aaPredicted RBP16.63■□□□□ 0.25
CCDC43-205ENST00000592333 ZNF775Q96BV0 537 aaPredicted RBP16.63■□□□□ 0.25
CCDC43-205ENST00000592333 ZG16BQ96DA0 208 aa16.63■□□□□ 0.25
CCDC43-205ENST00000592333 ARL5BQ96KC2 179 aa16.63■□□□□ 0.25
CCDC43-205ENST00000592333 PANX1Q96RD7 426 aa16.63■□□□□ 0.25
CCDC43-205ENST00000592333 NAA11Q9BSU3 229 aaPredicted RBP16.63■□□□□ 0.25
CCDC43-205ENST00000592333 DCTN4Q9UJW0 460 aa16.63■□□□□ 0.25
CCDC43-205ENST00000592333 SLC9A8Q9Y2E8 581 aa16.63■□□□□ 0.25
CCDC43-205ENST00000592333 CIB4A0PJX0 185 aa16.62■□□□□ 0.25
CCDC43-205ENST00000592333 PRAMEF27A3QJZ7 478 aa16.62■□□□□ 0.25
CCDC43-205ENST00000592333 CCDC154A6NI56 674 aa16.62■□□□□ 0.25
CCDC43-205ENST00000592333 ABCD4O14678 606 aa16.62■□□□□ 0.25
CCDC43-205ENST00000592333 PGRP06401 933 aa16.62■□□□□ 0.25
CCDC43-205ENST00000592333 RPS4Y1P22090 263 aaKnown RBP16.62■□□□□ 0.25
CCDC43-205ENST00000592333 PAX7P23759 505 aa16.62■□□□□ 0.25
CCDC43-205ENST00000592333 EDNRAP25101 427 aa16.62■□□□□ 0.25
CCDC43-205ENST00000592333 IDH2P48735 452 aaKnown RBP16.62■□□□□ 0.25
CCDC43-205ENST00000592333 CASP9P55211 416 aa16.62■□□□□ 0.25
CCDC43-205ENST00000592333 DSCR9P59020 149 aa16.62■□□□□ 0.25
CCDC43-205ENST00000592333 KRTAP1-1Q07627 177 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms