RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 PIF1Q9H611 641 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 SELENONQ9NZV5 590 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 NDRG3Q9UGV2 375 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 PRDM4Q9UKN5 801 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 TMED7Q9Y3B3 224 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 PHF3Q92576 2039 aaKnown RBP9.02□□□□□ -0.97
BRCA1-227ENST00000591849 F8P00451 2351 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 TRBV5-3A0A0A0MS03 114 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 IGHV3-15A0A0B4J1V0 119 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 A8MXE2 369 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 ETV2O00321 342 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-227ENST00000591849 DYNC1I1O14576 645 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 TNFSF13O75888 250 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 PRF1P14222 555 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 POU2F1P14859 743 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 HOXB9P17482 250 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-227ENST00000591849 PRKAR1BP31321 381 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 CLK1P49759 484 aaKnown RBP9.01□□□□□ -0.97
BRCA1-227ENST00000591849 DIO1P49895 249 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 MAP2K6P52564 334 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 SEC24CP53992 1094 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 NCALDP61601 193 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 RBBP4Q09028 425 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 ZNF239Q16600 458 aaKnown RBP9.01□□□□□ -0.97
BRCA1-227ENST00000591849 TRMT5Q32P41 509 aaKnown RBP9.01□□□□□ -0.97
BRCA1-227ENST00000591849 INTS11Q5TA45 600 aaKnown RBP9.01□□□□□ -0.97
BRCA1-227ENST00000591849 REP15Q6BDI9 236 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 OTOGQ6ZRI0 2925 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 ADGRG3Q86Y34 549 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 ARMC8Q8IUR7 673 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 SLC30A8Q8IWU4 369 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 ZNF295-AS1Q8N0V1 137 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 ZNF610Q8N9Z0 462 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 BHLHE22Q8NFJ8 381 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-227ENST00000591849 OR6K3Q8NGY3 331 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 OR10A6Q8NH74 314 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 LINC01560Q8TB33 94 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 FAM222BQ8WU58 562 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 C10orf82Q8WW14 230 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 ZNF524Q96C55 264 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 LRRC58Q96CX6 371 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 C14orf79Q96F83 325 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 TACO1Q9BSH4 297 aaKnown RBP9.01□□□□□ -0.97
BRCA1-227ENST00000591849 NAA11Q9BSU3 229 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-227ENST00000591849 KLHL4Q9C0H6 718 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 IKZF5Q9H5V7 419 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 TMEM38AQ9H6F2 299 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 C12orf49Q9H741 205 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 GALNT8Q9NY28 637 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 ELOVL5Q9NYP7 299 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 ARMCX1Q9P291 453 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 KLHL9Q9P2J3 617 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 OSGIN1Q9UJX0 560 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 HDGFL3Q9Y3E1 203 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 GMEB1Q9Y692 573 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 DSPPQ9NZW4 1301 aa9.01□□□□□ -0.97
BRCA1-227ENST00000591849 ANKRD17O75179 2603 aaKnown RBP9.01□□□□□ -0.97
BRCA1-227ENST00000591849 TMEM72A0PK05 275 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 GMNCA6NCL1 334 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 C16orf97H3BN30 126 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 FAAHO00519 579 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 SLC22A2O15244 555 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 SS18L1O75177 396 aaPredicted RBP9□□□□□ -0.97
BRCA1-227ENST00000591849 NPPAP01160 153 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 FESP07332 822 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 YES1P07947 543 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 CD8BP10966 210 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 IGFBP2P18065 325 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 CD79BP40259 229 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 GNGT1P63211 74 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 SLC35A1P78382 337 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 HOXC5Q00444 222 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 SORDQ00796 357 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 FAM27E3Q08E93 113 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 RASGEF1BQ0VAM2 473 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 COQ5Q5HYK3 327 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 NANOGP8Q6NSW7 305 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 DHRS4L2Q6PKH6 230 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 PATL1Q86TB9 770 aaKnown RBP9□□□□□ -0.97
BRCA1-227ENST00000591849 SERPINA11Q86U17 422 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 MTDHQ86UE4 582 aaKnown RBP9□□□□□ -0.97
BRCA1-227ENST00000591849 TUSC5Q8IXB3 177 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 POU5F2Q8N7G0 328 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 OR52E4Q8NGH9 312 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 RP9Q8TA86 221 aaKnown RBP9□□□□□ -0.97
BRCA1-227ENST00000591849 RNF128Q8TEB7 428 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 ABHD3Q8WU67 409 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 TAPBPLQ9BX59 468 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 OR11A1Q9GZK7 315 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 COQ10BQ9H8M1 238 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 NANOGQ9H9S0 305 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 TMEM27Q9HBJ8 222 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 MCCC2Q9HCC0 563 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 PLSCR4Q9NRQ2 329 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 CRIM1Q9NZV1 1036 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 JKAMPQ9P055 326 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 TMEM181Q9P2C4 612 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 POLQO75417 2590 aa9□□□□□ -0.97
BRCA1-227ENST00000591849 CELSR1Q9NYQ6 3014 aa8.99□□□□□ -0.97
BRCA1-227ENST00000591849 CSMD1Q96PZ7 3565 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms