RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 ESRP2Q9H6T0 727 aaKnown RBP9.22□□□□□ -0.93
VPS4B-207ENST00000591519 KLHL9Q9P2J3 617 aa9.22□□□□□ -0.93
VPS4B-207ENST00000591519 KCNE5Q9UJ90 142 aa9.22□□□□□ -0.93
VPS4B-207ENST00000591519 LAMP3Q9UQV4 416 aa9.22□□□□□ -0.93
VPS4B-207ENST00000591519 RNF115Q9Y4L5 304 aa9.22□□□□□ -0.93
VPS4B-207ENST00000591519 CADP27708 2225 aa9.21□□□□□ -0.93
VPS4B-207ENST00000591519 DPRXA6NFQ7 191 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 SERINC4A6NH21 518 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 E9PBE3 544 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 UBDO15205 165 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 SCN2BO60939 215 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 STX11O75558 287 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 PGM3O95394 542 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 SOD3P08294 240 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 UBL4AP11441 157 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 MATN1P21941 496 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 IL32P24001 234 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 PCSK6P29122 969 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 IL12AP29459 219 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 S100A3P33764 101 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 IDUAP35475 653 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 AQP5P55064 265 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 CASP9P55211 416 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 PHC1P78364 1004 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 TNK1Q13470 666 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 PDK3Q15120 406 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 TSC22D1Q15714 1073 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 NDUFAF6Q330K2 333 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 FAM174BQ3ZCQ3 159 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 ZNF672Q499Z4 452 aaPredicted RBP9.21□□□□□ -0.94
VPS4B-207ENST00000591519 TIGD2Q4W5G0 525 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 HEPHL1Q6MZM0 1159 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 OGFOD2Q6N063 350 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 TMPPEQ6ZT21 453 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 C6orf120Q7Z4R8 191 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 P2RY8Q86VZ1 359 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 ATP6V1C2Q8NEY4 427 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 OR8J2Q8NGG1 315 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 OR5D16Q8NGK9 328 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 SMAP2Q8WU79 429 aaPredicted RBP9.21□□□□□ -0.94
VPS4B-207ENST00000591519 ST8SIA1Q92185 356 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 FBXW5Q969U6 566 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 TRMT61AQ96FX7 289 aaKnown RBP9.21□□□□□ -0.94
VPS4B-207ENST00000591519 ZBTB18Q99592 522 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 POTEKPQ9BYX7 375 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 SAP130Q9H0E3 1048 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 SERHL2Q9H4I8 314 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 GPR45Q9Y5Y3 372 aa9.21□□□□□ -0.94
VPS4B-207ENST00000591519 IGKV3D-15A0A087WSY6 115 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 KIAA1324LA8MWY0 1029 aaPredicted RBP9.2□□□□□ -0.94
VPS4B-207ENST00000591519 TMEM229AB2RXF0 380 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 INAFM1C9JVW0 142 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 RNASET2O00584 256 aaKnown RBP9.2□□□□□ -0.94
VPS4B-207ENST00000591519 ANKRD28O15084 1053 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 SMAD9O15198 467 aaKnown RBP9.2□□□□□ -0.94
VPS4B-207ENST00000591519 POLR3GO15318 223 aaPredicted RBP9.2□□□□□ -0.94
VPS4B-207ENST00000591519 UGT2B17O75795 530 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 AGR2O95994 175 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 FESP07332 822 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 FKBP2P26885 142 aaKnown RBP9.2□□□□□ -0.94
VPS4B-207ENST00000591519 SLC7A1P30825 629 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 IDH3AP50213 366 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 CLNS1AP54105 237 aaKnown RBP9.2□□□□□ -0.94
VPS4B-207ENST00000591519 SESN3P58005 492 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 RPS26P62854 115 aaKnown RBP9.2□□□□□ -0.94
VPS4B-207ENST00000591519 PPP2R2BQ00005 443 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 KRTAP1-1Q07627 177 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 RASGEF1BQ0VAM2 473 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 SKP2Q13309 424 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 CLEC12BQ2HXU8 276 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 PGGHGQ32M88 737 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 TIMM23BQ5SRD1 257 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 PDZK1Q5T2W1 519 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 C3orf33Q6P1S2 294 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 EPGNQ6UW88 154 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 DNM1P46Q6ZS02 220 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 BHLHA15Q7RTS1 189 aaPredicted RBP9.2□□□□□ -0.94
VPS4B-207ENST00000591519 OR9I1Q8NGQ6 314 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 RFWD2Q8NHY2 731 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 TMEM234Q8WY98 164 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 MAELQ96JY0 434 aaKnown RBP9.2□□□□□ -0.94
VPS4B-207ENST00000591519 MDFIQ99750 246 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 THUMPD3Q9BV44 507 aaKnown RBP9.2□□□□□ -0.94
VPS4B-207ENST00000591519 TRIM2Q9C040 744 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 ZNF350Q9GZX5 532 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 NPHS2Q9NP85 383 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 TCF7L2Q9NQB0 619 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 POLE3Q9NRF9 147 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 SERINC1Q9NRX5 453 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 ACER3Q9NUN7 267 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 DCTN4Q9UJW0 460 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 PCDHGB4Q9UN71 923 aa9.2□□□□□ -0.94
VPS4B-207ENST00000591519 IGHV3-15A0A0B4J1V0 119 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 RNF103-CHMP3A0A140T963 221 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 PRSS51A0A1B0GVH4 220 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 DNPH1O43598 174 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 CRLF1O75462 422 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 SLC22A3O75751 556 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 H6PDO95479 791 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 CSTAP01040 98 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms