RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 SLX1AQ9BQ83 275 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 PRSS27Q9BQR3 290 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 ANKRD19PQ9H560 264 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 TMEM185BQ9H7F4 350 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 S100A14Q9HCY8 104 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 MAN2C1Q9NTJ4 1040 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 SPRR3Q9UBC9 169 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 STOML1Q9UBI4 398 aa13.7□□□□□ -0.22
ATG4D-211ENST00000589753 A0A1B0GTH9 108 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 A0A1W2PRQ8 180 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 GJE1A6NN92 205 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 A8MVM7 634 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 H0YHG0 523 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 H3BNX3 289 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 AQP7O14520 342 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 GNGT2O14610 69 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 ZNF208O43345 1280 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 KRT36O76013 467 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 FUT4P22083 530 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 FASP25445 335 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 FKBP2P26885 142 aaKnown RBP13.69□□□□□ -0.22
ATG4D-211ENST00000589753 RBM34P42696 430 aaKnown RBP13.69□□□□□ -0.22
ATG4D-211ENST00000589753 STARP49675 285 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 MLLT10P55197 1068 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 HSF1Q00613 529 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 DGCR6Q14129 220 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 FGD3Q5JSP0 725 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 VASNQ6EMK4 673 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 ARHGAP11AQ6P4F7 1023 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 TTC33Q6PID6 262 aaPredicted RBP13.69□□□□□ -0.22
ATG4D-211ENST00000589753 WDR88Q6ZMY6 472 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 OR52J3Q8NH60 311 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 CPT1CQ8TCG5 803 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 TMEM255BQ8WV15 326 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 SMPDL3BQ92485 455 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 DDIT4LQ96D03 193 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 HS6ST2Q96MM7 605 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 BBC3Q96PG8 261 aaPredicted RBP13.69□□□□□ -0.22
ATG4D-211ENST00000589753 REEP1Q9H902 201 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 DNAJB9Q9UBS3 223 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 CACNA1BQ00975 2339 aa13.69□□□□□ -0.22
ATG4D-211ENST00000589753 TNFRSF11BO00300 401 aa13.68□□□□□ -0.22
ATG4D-211ENST00000589753 CLOCKO15516 846 aa13.68□□□□□ -0.22
ATG4D-211ENST00000589753 DEAF1O75398 565 aaPredicted RBP13.68□□□□□ -0.22
ATG4D-211ENST00000589753 OPN1LWP04000 364 aa13.68□□□□□ -0.22
ATG4D-211ENST00000589753 TFPIP10646 304 aa13.68□□□□□ -0.22
ATG4D-211ENST00000589753 SFTPDP35247 375 aa13.68□□□□□ -0.22
ATG4D-211ENST00000589753 CLK1P49759 484 aaKnown RBP13.68□□□□□ -0.22
ATG4D-211ENST00000589753 LHX2P50458 406 aa13.68□□□□□ -0.22
ATG4D-211ENST00000589753 CRYZQ08257 329 aaKnown RBP13.68□□□□□ -0.22
ATG4D-211ENST00000589753 ATP6AP1Q15904 470 aa13.68□□□□□ -0.22
ATG4D-211ENST00000589753 BCL2A1Q16548 175 aa13.68□□□□□ -0.22
ATG4D-211ENST00000589753 TMEM176BQ3YBM2 270 aaPredicted RBP13.68□□□□□ -0.22
ATG4D-211ENST00000589753 SYT14P1Q58G82 188 aa13.68□□□□□ -0.22
ATG4D-211ENST00000589753 DCST1Q5T197 706 aa13.68□□□□□ -0.22
ATG4D-211ENST00000589753 LSRQ86X29 649 aaPredicted RBP13.68□□□□□ -0.22
ATG4D-211ENST00000589753 STK35Q8TDR2 534 aa13.68□□□□□ -0.22
ATG4D-211ENST00000589753 TMEM239Q8WW34 195 aa13.68□□□□□ -0.22
ATG4D-211ENST00000589753 LRTOMTQ8WZ04 291 aa13.68□□□□□ -0.22
ATG4D-211ENST00000589753 SARAFQ96BY9 339 aa13.68□□□□□ -0.22
ATG4D-211ENST00000589753 TIMP4Q99727 224 aa13.68□□□□□ -0.22
ATG4D-211ENST00000589753 TMEM43Q9BTV4 400 aa13.68□□□□□ -0.22
ATG4D-211ENST00000589753 ZNF426Q9BUY5 554 aa13.68□□□□□ -0.22
ATG4D-211ENST00000589753 OR11A1Q9GZK7 315 aa13.68□□□□□ -0.22
ATG4D-211ENST00000589753 TNFRSF10DQ9UBN6 386 aa13.68□□□□□ -0.22
ATG4D-211ENST00000589753 SAMHD1Q9Y3Z3 626 aaKnown RBP13.68□□□□□ -0.22
ATG4D-211ENST00000589753 LYVE1Q9Y5Y7 322 aa13.68□□□□□ -0.22
ATG4D-211ENST00000589753 PIEZO2Q9H5I5 2752 aa13.68□□□□□ -0.22
ATG4D-211ENST00000589753 IGKV1D-42A0A075B6H8 117 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 TRBV4-1A0A0J9YWV2 114 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 OR14I1A6ND48 311 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 SEC14L5O43304 696 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 LDLRP01130 860 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 EDN3P14138 238 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 ZNF708P17019 499 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 PTNP21246 168 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 SHC1P29353 583 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 HMGA2P52926 109 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 CLDN18P56856 261 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 EGR4Q05215 589 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 PODNL1Q6PEZ8 512 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 C5orf46Q6UWT4 87 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 ZNF730Q6ZMV8 503 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 UBQLNLQ8IYU4 475 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 MEIOBQ8N635 442 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 SLC7A13Q8TCU3 470 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 ACOT11Q8WXI4 607 aaPredicted RBP13.67□□□□□ -0.22
ATG4D-211ENST00000589753 RELTQ969Z4 430 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 KLHL15Q96M94 604 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 ALPK1Q96QP1 1244 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 EPYCQ99645 322 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 POTEKPQ9BYX7 375 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 SLC19A3Q9BZV2 496 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 VNN3Q9NY84 501 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 TMCC3Q9ULS5 477 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 RRP15Q9Y3B9 282 aaKnown RBP13.67□□□□□ -0.22
ATG4D-211ENST00000589753 U3KQV3 271 aa13.67□□□□□ -0.22
ATG4D-211ENST00000589753 A0A087WUU8 490 aa13.66□□□□□ -0.22
ATG4D-211ENST00000589753 ZC3H12DA2A288 527 aaKnown RBP13.66□□□□□ -0.22
ATG4D-211ENST00000589753 NPIPA2E9PIF3 369 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms