RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 SLC19A3Q9BZV2 496 aa20.23■□□□□ 0.83
ATG4D-209ENST00000588857 PROK2Q9HC23 129 aa20.23■□□□□ 0.83
ATG4D-209ENST00000588857 MEPEQ9NQ76 525 aaPredicted RBP20.23■□□□□ 0.83
ATG4D-209ENST00000588857 C20orf141Q9NUB4 165 aa20.23■□□□□ 0.83
ATG4D-209ENST00000588857 OSGIN1Q9UJX0 560 aa20.23■□□□□ 0.83
ATG4D-209ENST00000588857 LHX6Q9UPM6 363 aa20.23■□□□□ 0.83
ATG4D-209ENST00000588857 GMPPBQ9Y5P6 360 aa20.23■□□□□ 0.83
ATG4D-209ENST00000588857 B4DXG7 233 aa20.22■□□□□ 0.83
ATG4D-209ENST00000588857 G3V3Y1 287 aa20.22■□□□□ 0.83
ATG4D-209ENST00000588857 POU1F1P28069 291 aa20.22■□□□□ 0.83
ATG4D-209ENST00000588857 EPHA2P29317 976 aa20.22■□□□□ 0.83
ATG4D-209ENST00000588857 CRISP1P54107 249 aa20.22■□□□□ 0.83
ATG4D-209ENST00000588857 TLE3Q04726 772 aa20.22■□□□□ 0.83
ATG4D-209ENST00000588857 CRYZQ08257 329 aaKnown RBP20.22■□□□□ 0.83
ATG4D-209ENST00000588857 IL18R1Q13478 541 aa20.22■□□□□ 0.83
ATG4D-209ENST00000588857 INPP5JQ15735 1006 aaPredicted RBP20.22■□□□□ 0.83
ATG4D-209ENST00000588857 DEFB109BQ30KR1 87 aa20.22■□□□□ 0.83
ATG4D-209ENST00000588857 POMZP3Q6PJE2 187 aa20.22■□□□□ 0.83
ATG4D-209ENST00000588857 USP51Q70EK9 711 aa20.22■□□□□ 0.83
ATG4D-209ENST00000588857 P3H2Q8IVL5 708 aa20.22■□□□□ 0.83
ATG4D-209ENST00000588857 FADS6Q8N9I5 356 aa20.22■□□□□ 0.83
ATG4D-209ENST00000588857 PCDHGB6Q9Y5F9 930 aa20.22■□□□□ 0.83
ATG4D-209ENST00000588857 HTR3EA5X5Y0 456 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 KLF4O43474 513 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 SOX14O95416 240 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 WDPCPO95876 746 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 PRKCAP17252 672 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 CHMP24386 653 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 CCL11P51671 97 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 RPS6KA3P51812 740 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 KEAP1Q14145 624 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 ARSKQ6UWY0 536 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 TMPRSS11FQ6ZWK6 438 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 ZNF227Q86WZ6 799 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 C8orf59Q8N0T1 100 aaPredicted RBP20.21■□□□□ 0.83
ATG4D-209ENST00000588857 OR1J4Q8NGS1 313 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 TMEM41AQ96HV5 264 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 JSRP1Q96MG2 331 aaPredicted RBP20.21■□□□□ 0.83
ATG4D-209ENST00000588857 APOL4Q9BPW4 351 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 MED17Q9NVC6 651 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 PLA2G3Q9NZ20 509 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 FBXL2Q9UKC9 423 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 VDAC3Q9Y277 283 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 HRH3Q9Y5N1 445 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 TMED7-TICAM2A0A0A6YYA0 188 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 UNC119BA6NIH7 251 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 SNPHO15079 494 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 EFSO43281 561 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 RPSAP08865 295 aaKnown RBP20.21■□□□□ 0.83
ATG4D-209ENST00000588857 SAGP10523 405 aaPredicted RBP20.21■□□□□ 0.83
ATG4D-209ENST00000588857 CCNA2P20248 432 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 MAKP20794 623 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 OR1C1Q15619 314 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 SPINK14Q6IE38 97 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 RASSF6Q6ZTQ3 369 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 SETD9Q8NE22 299 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 NTNG2Q96CW9 530 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 C1GALT1C1Q96EU7 318 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 HRASLS5Q96KN8 279 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 UBAP1Q9NZ09 502 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 NDRG4Q9ULP0 352 aaKnown RBP20.21■□□□□ 0.83
ATG4D-209ENST00000588857 TMED7Q9Y3B3 224 aa20.21■□□□□ 0.83
ATG4D-209ENST00000588857 ENO4A6NNW6 628 aa20.2■□□□□ 0.82
ATG4D-209ENST00000588857 EFCAB9A8MZ26 197 aa20.2■□□□□ 0.82
ATG4D-209ENST00000588857 SLC25A12O75746 678 aa20.2■□□□□ 0.82
ATG4D-209ENST00000588857 MFAP5Q13361 173 aa20.2■□□□□ 0.82
ATG4D-209ENST00000588857 PTGES3Q15185 160 aaKnown RBP20.2■□□□□ 0.82
ATG4D-209ENST00000588857 ZNF691Q5VV52 312 aa20.2■□□□□ 0.82
ATG4D-209ENST00000588857 TIGD3Q6B0B8 471 aa20.2■□□□□ 0.82
ATG4D-209ENST00000588857 LSRQ86X29 649 aaPredicted RBP20.2■□□□□ 0.82
ATG4D-209ENST00000588857 SGTBQ96EQ0 304 aa20.2■□□□□ 0.82
ATG4D-209ENST00000588857 NR1H4Q96RI1 486 aaPredicted RBP20.2■□□□□ 0.82
ATG4D-209ENST00000588857 PITX2Q99697 317 aa20.2■□□□□ 0.82
ATG4D-209ENST00000588857 SSUH2Q9Y2M2 353 aa20.2■□□□□ 0.82
ATG4D-209ENST00000588857 IGKV1D-42A0A075B6H8 117 aa20.19■□□□□ 0.82
ATG4D-209ENST00000588857 CDC42EP2O14613 210 aa20.19■□□□□ 0.82
ATG4D-209ENST00000588857 NEURL1O76050 574 aa20.19■□□□□ 0.82
ATG4D-209ENST00000588857 CNR1P21554 472 aa20.19■□□□□ 0.82
ATG4D-209ENST00000588857 APOBEC1P41238 236 aaKnown RBP20.19■□□□□ 0.82
ATG4D-209ENST00000588857 DNASE1L1P49184 302 aa20.19■□□□□ 0.82
ATG4D-209ENST00000588857 PLPPR5Q32ZL2 321 aa20.19■□□□□ 0.82
ATG4D-209ENST00000588857 Q6ZPB1 254 aaPredicted RBP20.19■□□□□ 0.82
ATG4D-209ENST00000588857 CRELD1Q96HD1 420 aa20.19■□□□□ 0.82
ATG4D-209ENST00000588857 MRGPRX4Q96LA9 322 aa20.19■□□□□ 0.82
ATG4D-209ENST00000588857 SIGLEC12Q96PQ1 595 aa20.19■□□□□ 0.82
ATG4D-209ENST00000588857 A0A087WZY1 265 aa20.18■□□□□ 0.82
ATG4D-209ENST00000588857 OR5H15A6NDH6 313 aa20.18■□□□□ 0.82
ATG4D-209ENST00000588857 SUSD5O60279 629 aa20.18■□□□□ 0.82
ATG4D-209ENST00000588857 TRIM3O75382 744 aaPredicted RBP20.18■□□□□ 0.82
ATG4D-209ENST00000588857 CBR3O75828 277 aa20.18■□□□□ 0.82
ATG4D-209ENST00000588857 IGF2P01344 180 aa20.18■□□□□ 0.82
ATG4D-209ENST00000588857 TP53P04637 393 aaPredicted RBP20.18■□□□□ 0.82
ATG4D-209ENST00000588857 IGFBP1P08833 259 aaPredicted RBP20.18■□□□□ 0.82
ATG4D-209ENST00000588857 DLX5P56178 289 aa20.18■□□□□ 0.82
ATG4D-209ENST00000588857 BROXQ5VW32 411 aa20.18■□□□□ 0.82
ATG4D-209ENST00000588857 THAP5Q7Z6K1 395 aa20.18■□□□□ 0.82
ATG4D-209ENST00000588857 ADGRG3Q86Y34 549 aa20.18■□□□□ 0.82
ATG4D-209ENST00000588857 TEX47Q8TBZ9 253 aa20.18■□□□□ 0.82
ATG4D-209ENST00000588857 OSTF1Q92882 214 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms