RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 TENM4Q6N022 2769 aa17.07■□□□□ 0.32
CLPTM1-209ENST00000588855 A0A0J9YW62 118 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 KDM4EB2RXH2 506 aaPredicted RBP17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 ACOT8O14734 319 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 TNFSF11O14788 317 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 ACVR2AP27037 513 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 TMEM176BQ3YBM2 270 aaPredicted RBP17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 ACSF3Q4G176 576 aaPredicted RBP17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 SYT14P1Q58G82 188 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 ALG10BQ5I7T1 473 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 RTL6Q6ICC9 239 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 ASRGL1Q7L266 308 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 ADAMTS16Q8TE57 1224 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 AMBRA1Q9C0C7 1298 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 OR11A1Q9GZK7 315 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 COQ10BQ9H8M1 238 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 FAM215AQ9Y5M1 114 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 A0A1W2PNR3 127 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 AHRRA9YTQ3 701 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 IFNW1P05000 195 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 GABRA1P14867 456 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 CXCR1P25024 350 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 KCNC4Q03721 635 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 C1orf185Q5T7R7 199 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 ULK3Q6PHR2 472 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 PLXDC2Q6UX71 529 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 ESPNLQ6ZVH7 1005 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 NCCRP1Q6ZVX7 275 aaPredicted RBP17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 RNF217Q8TC41 542 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 SLC25A43Q8WUT9 341 aaPredicted RBP17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 DNAJA4Q8WW22 397 aaPredicted RBP17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 DNAJA3Q96EY1 480 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 SLC7A8Q9UHI5 535 aa17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 SPIN1Q9Y657 262 aaPredicted RBP17.06■□□□□ 0.32
CLPTM1-209ENST00000588855 MYO7BQ6PIF6 2116 aa17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 HELZ2Q9BYK8 2649 aaKnown RBP17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 TCRBV5S2A0A599 114 aa17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 ZC3H12DA2A288 527 aaKnown RBP17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 ELOA3DA6NLF2 546 aaPredicted RBP17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 GJE1A6NN92 205 aa17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 ADAMDEC1O15204 470 aa17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 THY1P04216 161 aa17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 SLC7A1P30825 629 aa17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 EIF1AXP47813 144 aaKnown RBP17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 CDH12P55289 794 aa17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 TRAP1Q12931 704 aaKnown RBP17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 ELOA3BQ3SY89 546 aa17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 MTX3Q5HYI7 312 aa17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 ZNF613Q6PF04 617 aa17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 RPTNQ6XPR3 784 aa17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 FJX1Q86VR8 437 aa17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 ELOA3Q8NG57 546 aa17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 OR10D3Q8NH80 312 aa17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 OR2V1Q8NHB1 315 aa17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 ZPLD1Q8TCW7 415 aa17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 PYURFQ96I23 114 aa17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 ZNF845Q96IR2 970 aaPredicted RBP17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 ARL5BQ96KC2 179 aa17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 OR5B2Q96R09 309 aa17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 C12orf10Q9HB07 376 aa17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 POMPQ9Y244 141 aa17.05■□□□□ 0.32
CLPTM1-209ENST00000588855 TRAPPC13A5PLN9 417 aa17.04■□□□□ 0.32
CLPTM1-209ENST00000588855 CLCA1A8K7I4 914 aa17.04■□□□□ 0.32
CLPTM1-209ENST00000588855 CCL21O00585 134 aa17.04■□□□□ 0.32
CLPTM1-209ENST00000588855 ZNF208O43345 1280 aa17.04■□□□□ 0.32
CLPTM1-209ENST00000588855 LYPD3O95274 346 aa17.04■□□□□ 0.32
CLPTM1-209ENST00000588855 SEMG1P04279 462 aa17.04■□□□□ 0.32
CLPTM1-209ENST00000588855 TFPIP10646 304 aa17.04■□□□□ 0.32
CLPTM1-209ENST00000588855 YAP1P46937 504 aaKnown RBP17.04■□□□□ 0.32
CLPTM1-209ENST00000588855 TAS2R41P59536 307 aa17.04■□□□□ 0.32
CLPTM1-209ENST00000588855 RPS3AP61247 264 aaKnown RBP17.04■□□□□ 0.32
CLPTM1-209ENST00000588855 PIN1Q13526 163 aaPredicted RBP17.04■□□□□ 0.32
CLPTM1-209ENST00000588855 HBMQ6B0K9 141 aa17.04■□□□□ 0.32
CLPTM1-209ENST00000588855 TSEN54Q7Z6J9 526 aaKnown RBP17.04■□□□□ 0.32
CLPTM1-209ENST00000588855 ADGRE4PQ86SQ3 457 aa17.04■□□□□ 0.32
CLPTM1-209ENST00000588855 SLC38A4Q969I6 547 aa17.04■□□□□ 0.32
CLPTM1-209ENST00000588855 SLC47A1Q96FL8 570 aa17.04■□□□□ 0.32
CLPTM1-209ENST00000588855 TRIB1Q96RU8 372 aa17.04■□□□□ 0.32
CLPTM1-209ENST00000588855 SELENONQ9NZV5 590 aa17.04■□□□□ 0.32
CLPTM1-209ENST00000588855 SLC7A7Q9UM01 511 aa17.04■□□□□ 0.32
CLPTM1-209ENST00000588855 MEMO1Q9Y316 297 aa17.04■□□□□ 0.32
CLPTM1-209ENST00000588855 GCN1Q92616 2671 aaKnown RBP17.04■□□□□ 0.32
CLPTM1-209ENST00000588855 DOCK7Q96N67 2140 aa17.04■□□□□ 0.32
CLPTM1-209ENST00000588855 J3KTA2 159 aa17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 LRRTM2O43300 516 aa17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 CHP2O43745 196 aa17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 CXCL13O43927 109 aa17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 STAMBPO95630 424 aa17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 PTNP21246 168 aa17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 PTGER4P35408 488 aa17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 VLDLRP98155 873 aa17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 C4orf17Q53FE4 359 aa17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 SWT1Q5T5J6 900 aaKnown RBP17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 B3GNT6Q6ZMB0 384 aa17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 WDR88Q6ZMY6 472 aa17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 CHMP1BQ7LBR1 199 aa17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 MARVELD2Q8N4S9 558 aa17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 DDIT4LQ96D03 193 aa17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 SLC41A3Q96GZ6 507 aa17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 C7orf34Q96L11 122 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms