RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 SUSD5O60279 629 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 NME2P1O60361 137 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 TP53P04637 393 aaPredicted RBP10.24□□□□□ -0.77
VMP1-207ENST00000588131 IGFBP1P08833 259 aaPredicted RBP10.24□□□□□ -0.77
VMP1-207ENST00000588131 RFPL3SP0C7P2 107 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 HK1P19367 917 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 FUT1P19526 365 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 IL11P20809 199 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 NME2P22392 152 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 CXCR1P25024 350 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 IFNGR2P38484 337 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 GSSP48637 474 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 CD97P48960 835 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 TNFSF10P50591 281 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 RAD23AP54725 363 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 CTBP2P56545 445 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 ALDH6A1Q02252 535 aaKnown RBP10.24□□□□□ -0.77
VMP1-207ENST00000588131 EGR4Q05215 589 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 CRYZQ08257 329 aaKnown RBP10.24□□□□□ -0.77
VMP1-207ENST00000588131 UNQ6494/PRO21346Q6UXR6 183 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 LRRC69Q6ZNQ3 347 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 Q6ZPB1 254 aaPredicted RBP10.24□□□□□ -0.77
VMP1-207ENST00000588131 GALNTL5Q7Z4T8 443 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 KIF18BQ86Y91 864 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 SCMH1Q96GD3 660 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 RDH12Q96NR8 316 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 SMAD5Q99717 465 aaKnown RBP10.24□□□□□ -0.77
VMP1-207ENST00000588131 FAM173AQ9BQD7 235 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 TMEM43Q9BTV4 400 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 ADI1Q9BV57 179 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 GABARAPL3Q9BY60 117 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 PTGES2Q9H7Z7 377 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 ZNF556Q9HAH1 456 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 REV1Q9UBZ9 1251 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 POFUT2Q9Y2G5 429 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 C15orf41Q9Y2V0 281 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 ORC6Q9Y5N6 252 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 NCKAP5O14513 1909 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 FREM2Q5SZK8 3169 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 A0A087WZY1 265 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 ZC3H12DA2A288 527 aaKnown RBP10.23□□□□□ -0.77
VMP1-207ENST00000588131 E9PQ18 207 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 CDC42EP2O14613 210 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 EFNA2O43921 213 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 ZIC3O60481 467 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 CBR3O75828 277 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 SOX14O95416 240 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 CLIC3O95833 236 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 PDGFAP04085 211 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 CD46P15529 392 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 FPR3P25089 353 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 DPP4P27487 766 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 EPHA2P29317 976 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 RFC3P40938 356 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 HTR3AP46098 478 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 HSPA13P48723 471 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 MEOX1P50221 254 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 DSCR4P56555 118 aaPredicted RBP10.23□□□□□ -0.77
VMP1-207ENST00000588131 TMPRSS3P57727 454 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 ADARB1P78563 741 aaKnown RBP10.23□□□□□ -0.77
VMP1-207ENST00000588131 TSPAN31Q12999 210 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 TAF11Q15544 211 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 TMEM44Q2T9K0 475 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 RFX4Q33E94 735 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 SLC36A3Q495N2 470 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 ZNF766Q5HY98 468 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 C1QL3Q5VWW1 255 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 TMPRSS11FQ6ZWK6 438 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 SLC46A3Q7Z3Q1 461 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 PARP8Q8N3A8 854 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 DHRSXQ8N5I4 330 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 CYGBQ8WWM9 190 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 TFAP2CQ92754 450 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 RELTQ969Z4 430 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 BPIFA2Q96DR5 249 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 DNAJA3Q96EY1 480 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 MRGPRX4Q96LA9 322 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 C5orf34Q96MH7 638 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 UBL7Q96S82 380 aaPredicted RBP10.23□□□□□ -0.77
VMP1-207ENST00000588131 ZFP64Q9NPA5 681 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 KRCC1Q9NPI7 259 aaPredicted RBP10.23□□□□□ -0.77
VMP1-207ENST00000588131 FAM118AQ9NWS6 357 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 DKKL1Q9UK85 242 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 RAB26Q9ULW5 256 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 BOKQ9UMX3 212 aaPredicted RBP10.23□□□□□ -0.77
VMP1-207ENST00000588131 TMEM5Q9Y2B1 443 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 RPH3AQ9Y2J0 694 aaPredicted RBP10.23□□□□□ -0.77
VMP1-207ENST00000588131 KLF13Q9Y2Y9 288 aaPredicted RBP10.23□□□□□ -0.77
VMP1-207ENST00000588131 ASPMQ8IZT6 3477 aa10.23□□□□□ -0.77
VMP1-207ENST00000588131 TNRC6AQ8NDV7 1962 aaKnown RBP10.23□□□□□ -0.77
VMP1-207ENST00000588131 EFCAB9A8MZ26 197 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 K7EM74 188 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 NPIPB7O75200 414 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 CH25HO95992 272 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 GNAO1P09471 354 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 OSMP13725 252 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 GSTM3P21266 225 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 SRD5A2P31213 254 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 CAPGP40121 348 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 APOBEC1P41238 236 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms