RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 SPENQ96T58 3664 aaKnown RBP13.53□□□□□ -0.24
NFIX-208ENST00000587260 SHISA8B8ZZ34 492 aa13.53□□□□□ -0.24
NFIX-208ENST00000587260 ADAP00813 363 aa13.53□□□□□ -0.24
NFIX-208ENST00000587260 GDF1P27539 372 aa13.53□□□□□ -0.24
NFIX-208ENST00000587260 HTR3AP46098 478 aa13.53□□□□□ -0.24
NFIX-208ENST00000587260 ZNF41P51814 821 aaPredicted RBP13.53□□□□□ -0.24
NFIX-208ENST00000587260 AQP4P55087 323 aa13.53□□□□□ -0.24
NFIX-208ENST00000587260 FOXD4Q12950 439 aaPredicted RBP13.53□□□□□ -0.24
NFIX-208ENST00000587260 LY6DQ14210 128 aa13.53□□□□□ -0.24
NFIX-208ENST00000587260 QPRTQ15274 297 aa13.53□□□□□ -0.24
NFIX-208ENST00000587260 RFX4Q33E94 735 aa13.53□□□□□ -0.24
NFIX-208ENST00000587260 SLC25A53Q5H9E4 307 aa13.53□□□□□ -0.24
NFIX-208ENST00000587260 C1orf94Q6P1W5 598 aa13.53□□□□□ -0.24
NFIX-208ENST00000587260 WDR88Q6ZMY6 472 aa13.53□□□□□ -0.24
NFIX-208ENST00000587260 FAM98AQ8NCA5 519 aaKnown RBP13.53□□□□□ -0.24
NFIX-208ENST00000587260 TMEM239Q8WW34 195 aa13.53□□□□□ -0.24
NFIX-208ENST00000587260 C1GALT1C1Q96EU7 318 aa13.53□□□□□ -0.24
NFIX-208ENST00000587260 TACO1Q9BSH4 297 aaKnown RBP13.53□□□□□ -0.24
NFIX-208ENST00000587260 DGCR6LQ9BY27 220 aa13.53□□□□□ -0.24
NFIX-208ENST00000587260 ZNF703Q9H7S9 590 aaPredicted RBP13.53□□□□□ -0.24
NFIX-208ENST00000587260 PTGES2Q9H7Z7 377 aa13.53□□□□□ -0.24
NFIX-208ENST00000587260 TAS2R10Q9NYW0 307 aa13.53□□□□□ -0.24
NFIX-208ENST00000587260 B4GALT7Q9UBV7 327 aa13.53□□□□□ -0.24
NFIX-208ENST00000587260 LRRC42Q9Y546 428 aa13.53□□□□□ -0.24
NFIX-208ENST00000587260 NBEAQ8NFP9 2946 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 HTR3EA5X5Y0 456 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 ERVH48-1M5A8F1 160 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 OR10H3O60404 316 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 NTN1O95631 604 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 IGF2P01344 180 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 GASTP01350 101 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 GP1BBP13224 206 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 IFNGR2P38484 337 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 HSPA13P48723 471 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 PLEKHN1Q494U1 663 aaPredicted RBP13.52□□□□□ -0.25
NFIX-208ENST00000587260 NHSL2Q5HYW2 709 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 ANKRD34AQ69YU3 496 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 PGBD2Q6P3X8 592 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 CD300LDQ6UXZ3 194 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 ZNF730Q6ZMV8 503 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 GRINAQ7Z429 371 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 ZER1Q7Z7L7 766 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 ATG16L2Q8NAA4 619 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 ZFP62Q8NB50 900 aaPredicted RBP13.52□□□□□ -0.25
NFIX-208ENST00000587260 OR9Q2Q8NGE9 314 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 RNF217Q8TC41 542 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 TMEM255BQ8WV15 326 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 NPAS1Q99742 590 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 SLC19A3Q9BZV2 496 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 MED17Q9NVC6 651 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 SMPD3Q9NY59 655 aaPredicted RBP13.52□□□□□ -0.25
NFIX-208ENST00000587260 RPH3AQ9Y2J0 694 aaPredicted RBP13.52□□□□□ -0.25
NFIX-208ENST00000587260 PIEZO2Q9H5I5 2752 aa13.52□□□□□ -0.25
NFIX-208ENST00000587260 BSNQ9UPA5 3926 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 A0A087WZY1 265 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 FAM47E-STBD1D6RA91 191 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 CBR3O75828 277 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 TRAPPC6AO75865 159 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 GLSO94925 669 aaPredicted RBP13.51□□□□□ -0.25
NFIX-208ENST00000587260 WISP1O95388 367 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 PRKCAP17252 672 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 DPP4P27487 766 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 TACR3P29371 465 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 MAGEA5P43359 124 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 OMPP47874 163 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 MAP2K6P52564 334 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 RAD23AP54725 363 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 CTBP2P56545 445 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 COX10Q12887 443 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 FOXF1Q12946 379 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 POMZP3Q6PJE2 187 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 RRM2BQ7LG56 351 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 PARP8Q8N3A8 854 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 TMEM251Q8N6I4 163 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 AQP11Q8NBQ7 271 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 OR5M1Q8NGP8 315 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 MRGPRX4Q96LA9 322 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 TMEM43Q9BTV4 400 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 TSPAN10Q9H1Z9 355 aaPredicted RBP13.51□□□□□ -0.25
NFIX-208ENST00000587260 UBQLN3Q9H347 655 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 OSGIN1Q9UJX0 560 aa13.51□□□□□ -0.25
NFIX-208ENST00000587260 FREM3P0C091 2139 aa13.5□□□□□ -0.25
NFIX-208ENST00000587260 ACOT7O00154 380 aa13.5□□□□□ -0.25
NFIX-208ENST00000587260 KLF4O43474 513 aa13.5□□□□□ -0.25
NFIX-208ENST00000587260 CELA3AP09093 270 aa13.5□□□□□ -0.25
NFIX-208ENST00000587260 ZNF24P17028 368 aa13.5□□□□□ -0.25
NFIX-208ENST00000587260 HK1P19367 917 aa13.5□□□□□ -0.25
NFIX-208ENST00000587260 PTNP21246 168 aa13.5□□□□□ -0.25
NFIX-208ENST00000587260 IGFBP5P24593 272 aa13.5□□□□□ -0.25
NFIX-208ENST00000587260 ADH6P28332 368 aa13.5□□□□□ -0.25
NFIX-208ENST00000587260 APOBEC1P41238 236 aaKnown RBP13.5□□□□□ -0.25
NFIX-208ENST00000587260 POLR2HP52434 150 aaKnown RBP13.5□□□□□ -0.25
NFIX-208ENST00000587260 UGT2B15P54855 530 aa13.5□□□□□ -0.25
NFIX-208ENST00000587260 DSCR4P56555 118 aaPredicted RBP13.5□□□□□ -0.25
NFIX-208ENST00000587260 PPIAP62937 165 aaKnown RBP13.5□□□□□ -0.25
NFIX-208ENST00000587260 LSM11P83369 360 aaKnown RBP eCLIP13.5□□□□□ -0.25
NFIX-208ENST00000587260 FOXK1P85037 733 aa13.5□□□□□ -0.25
NFIX-208ENST00000587260 CACNA1BQ00975 2339 aa13.5□□□□□ -0.25
NFIX-208ENST00000587260 PRKCDQ05655 676 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms