RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 RTL6Q6ICC9 239 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 IL20RBQ6UXL0 311 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 RANBP3LQ86VV4 465 aaPredicted RBP7.13□□□□□ -1.27
VMP1-204ENST00000587259 TSPYL5Q86VY4 417 aaPredicted RBP7.13□□□□□ -1.27
VMP1-204ENST00000587259 OFCC1Q8IZS5 231 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 DEPDC4Q8N2C3 294 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 ZNF786Q8N393 782 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 TMEM156Q8N614 296 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 SMYD1Q8NB12 490 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 C16orf52Q8NHV5 167 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 DOK4Q8TEW6 326 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 ASB5Q8WWX0 329 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 SLC9A6Q92581 669 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 HDAC2Q92769 488 aaKnown RBP7.13□□□□□ -1.27
VMP1-204ENST00000587259 UCN3Q969E3 161 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 ANKRD9Q96BM1 317 aaPredicted RBP7.13□□□□□ -1.27
VMP1-204ENST00000587259 LMF2Q9BU23 707 aaKnown RBP7.13□□□□□ -1.27
VMP1-204ENST00000587259 AMBRA1Q9C0C7 1298 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 ZNF350Q9GZX5 532 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 SLC38A1Q9H2H9 487 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 TP63Q9H3D4 680 aaPredicted RBP7.13□□□□□ -1.27
VMP1-204ENST00000587259 CXorf21Q9HAI6 301 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 Q9N2J8 555 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 CCNB1IP1Q9NPC3 277 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 ADAP2Q9NPF8 381 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 PAPOLBQ9NRJ5 636 aaKnown RBP7.13□□□□□ -1.27
VMP1-204ENST00000587259 FAM118AQ9NWS6 357 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 ALKBH4Q9NXW9 302 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 Q9UFV3 132 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 MRTO4Q9UKD2 239 aaKnown RBP7.13□□□□□ -1.27
VMP1-204ENST00000587259 MGAT4BQ9UQ53 548 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 TESMINQ9Y4I5 508 aa7.13□□□□□ -1.27
VMP1-204ENST00000587259 DNHD1Q96M86 4753 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 FLNAP21333 2647 aaKnown RBP7.12□□□□□ -1.27
VMP1-204ENST00000587259 A6NHS1 94 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 TMEM229AB2RXF0 380 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 KLRC4-KLRK1H3BQV0 150 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 WWP2O00308 870 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 KIAA0513O60268 411 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 FMO6PO60774 539 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 CTAG2O75638 210 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 NKX2-2O95096 273 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 CCDC159P0C7I6 412 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 GLI4P10075 376 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 IL7RP16871 459 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 GSTM3P21266 225 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 RPS4Y1P22090 263 aaKnown RBP7.12□□□□□ -1.27
VMP1-204ENST00000587259 SOX3P41225 446 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 MAGEA5P43359 124 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 OR1E2P47887 323 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 LIMS1P48059 325 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 DNASE1L1P49184 302 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 UGT2B15P54855 530 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 RGS8P57771 180 aaPredicted RBP7.12□□□□□ -1.27
VMP1-204ENST00000587259 TAS2R41P59536 307 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 CXCR4P61073 352 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 DCAF7P61962 342 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 MYBPC1Q00872 1141 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 FUT5Q11128 374 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 ST3GAL3Q11203 375 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 COX10Q12887 443 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 APOFQ13790 326 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 ELAVL1Q15717 326 aaKnown RBP7.12□□□□□ -1.27
VMP1-204ENST00000587259 MAPK11Q15759 364 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 DUSP5Q16690 384 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 ZNF691Q5VV52 312 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 TMEM211Q6ICI0 200 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 ARHGAP11AQ6P4F7 1023 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 TBPL2Q6SJ96 375 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 WDR53Q7Z5U6 358 aaPredicted RBP7.12□□□□□ -1.27
VMP1-204ENST00000587259 OR4N5Q8IXE1 308 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 CMIPQ8IY22 773 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 ZFP62Q8NB50 900 aaPredicted RBP7.12□□□□□ -1.27
VMP1-204ENST00000587259 PSD4Q8NDX1 1056 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 TSPAN14Q8NG11 270 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 OR2M7Q8NG81 312 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 GPR32P1Q8NGA4 272 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 OR4C15Q8NGM1 316 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 OR52P1PQ8NH57 321 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 OR14A16Q8NHC5 309 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 GPR151Q8TDV0 419 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 CDS1Q92903 461 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 DAZLQ92904 295 aaKnown RBP7.12□□□□□ -1.27
VMP1-204ENST00000587259 SLC38A4Q969I6 547 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 ZNF566Q969W8 418 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 FBXL20Q96IG2 436 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 ALPK1Q96QP1 1244 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 SDF2Q99470 211 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 PITX2Q99697 317 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 ARHGDIGQ99819 225 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 TTYH2Q9BSA4 534 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 FNDC11Q9BVV2 318 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 POLDIP3Q9BY77 421 aaKnown RBP7.12□□□□□ -1.27
VMP1-204ENST00000587259 ALOXE3Q9BYJ1 711 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 TTTY12Q9BZ98 90 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 PRRG3Q9BZD7 231 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 GRIP2Q9C0E4 1043 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 SAP130Q9H0E3 1048 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 CXXC4Q9H2H0 198 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 SMURF2Q9HAU4 748 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms