RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 TRAPPC4Q9Y296 219 aa12.39□□□□□ -0.43
PRKCSH-202ENST00000585540 INTS1Q8N201 2190 aaKnown RBP12.39□□□□□ -0.43
PRKCSH-202ENST00000585540 CLDN24A6NM45 220 aa12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 FAM220BPB1ANY3 271 aa12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 EIF1BO60739 113 aaKnown RBP12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 FMO6PO60774 539 aa12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 TNFSF13O75888 250 aa12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 TGM6O95932 706 aa12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 PLGP00747 810 aaPredicted RBP12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 PDK3Q15120 406 aa12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 GUSBP1Q15486 140 aa12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 ADRM1Q16186 407 aa12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 TMEM176BQ3YBM2 270 aaPredicted RBP12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 SWT1Q5T5J6 900 aaKnown RBP12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 C6orf89Q6UWU4 347 aa12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 GDF7Q7Z4P5 450 aa12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 RANBP3LQ86VV4 465 aaPredicted RBP12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 CALHM3Q86XJ0 350 aa12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 PTOV1Q86YD1 416 aa12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 ARMC8Q8IUR7 673 aa12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 OR10A6Q8NH74 314 aa12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 FNDC9Q8TBE3 224 aa12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 DNAJA4Q8WW22 397 aaPredicted RBP12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 FIG4Q92562 907 aa12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 INTS12Q96CB8 462 aaKnown RBP12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 KLHDC3Q9BQ90 382 aa12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 POTEKPQ9BYX7 375 aa12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 TRIM2Q9C040 744 aa12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 CTPS2Q9NRF8 586 aa12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 OSGIN1Q9UJX0 560 aa12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 MED12LQ86YW9 2145 aa12.38□□□□□ -0.43
PRKCSH-202ENST00000585540 HCFC1P51610 2035 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 TMED7-TICAM2A0A0A6YYA0 188 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 BCAS1O75363 584 aaPredicted RBP12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 PRKD3O94806 890 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 MFN2O95140 757 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 ENPP1P22413 925 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 CXCR1P25024 350 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 TACR3P29371 465 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 SSTR2P30874 369 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 ACAA2P42765 397 aaKnown RBP12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 GZMMP51124 257 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 CTBP2P56545 445 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 CDSNQ15517 529 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 C8orf82Q6P1X6 216 aaPredicted RBP12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 FCRLAQ7L513 359 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 STK32CQ86UX6 486 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 LIX1LQ8IVB5 337 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 DMRTC2Q8IXT2 367 aaPredicted RBP12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 ZZZ3Q8IYH5 903 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 STK35Q8TDR2 534 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 SLC26A7Q8TE54 656 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 ZNF845Q96IR2 970 aaPredicted RBP12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 NPAS1Q99742 590 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 ZNF559Q9BR84 538 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 GPATCH1Q9BRR8 931 aaKnown RBP12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 POLR2J2Q9GZM3 115 aaKnown RBP12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 POLR2J3Q9H1A7 115 aaKnown RBP12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 PIF1Q9H611 641 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 TMEM185BQ9H7F4 350 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 NDE1Q9NXR1 346 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 ELOVL5Q9NYP7 299 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 SELENONQ9NZV5 590 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 RPS6KB2Q9UBS0 482 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 TAGLN3Q9UI15 199 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 PROCRQ9UNN8 238 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 USP22Q9UPT9 525 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 TMED7Q9Y3B3 224 aa12.37□□□□□ -0.43
PRKCSH-202ENST00000585540 NKX2-6A6NCS4 301 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 KDM4EB2RXH2 506 aaPredicted RBP12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 EEF1E1-BLOC1S5C9J1V9 151 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 H0YC42 278 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 SULT2B1O00204 365 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 AP3D1O14617 1153 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 EEF1E1O43324 174 aaKnown RBP12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 EFNA2O43921 213 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 PNMTP11086 282 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 GRNP28799 593 aaKnown RBP12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 DIO1P49895 249 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 AGFG1P52594 562 aaKnown RBP12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 TPD52P55327 224 aaPredicted RBP12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 RGS8P57771 180 aaPredicted RBP12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 SLC35A1P78382 337 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 TMEM201Q5SNT2 666 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 MEX3BQ6ZN04 569 aaKnown RBP12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 ADGRG3Q86Y34 549 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 GCNT2Q8N0V5 402 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 CLIP4Q8N3C7 705 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 PIGXQ8TBF5 258 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 MARVELD3Q96A59 401 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 OR5B2Q96R09 309 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 USB1Q9BQ65 265 aaKnown RBP12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 UCK2Q9BZX2 261 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 OR10A4Q9H209 315 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 BCO1Q9HAY6 547 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 TMEM27Q9HBJ8 222 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 RLIMQ9NVW2 624 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 CMTM6Q9NX76 183 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 TMEM181Q9P2C4 612 aa12.36□□□□□ -0.43
PRKCSH-202ENST00000585540 KLHL13Q9P2N7 655 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms