RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 HNRNPCL2B2RXH8 293 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 HNRNPCL3B7ZW38 293 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 C5orf58C9J3I9 102 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 CLIC1O00299 241 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 FAAHO00519 579 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 DNPH1O43598 174 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 HNRNPCL1O60812 293 aaKnown RBP11.01□□□□□ -0.65
SS18-225ENST00000585121 SHOX2O60902 331 aaPredicted RBP11.01□□□□□ -0.65
SS18-225ENST00000585121 BCAS1O75363 584 aaPredicted RBP11.01□□□□□ -0.65
SS18-225ENST00000585121 PMS2P2O95744 297 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 FESP07332 822 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 HNRNPCL4P0DMR1 293 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 FPR1P21462 350 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 RPS4Y1P22090 263 aaKnown RBP11.01□□□□□ -0.65
SS18-225ENST00000585121 MAP2K6P52564 334 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 NR1H2P55055 460 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 OR2B6P58173 313 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 FADDQ13158 208 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 SLC2A7Q6PXP3 512 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 TFAP2EQ6VUC0 442 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 GALNT5Q7Z7M9 940 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 CXorf67Q86X51 503 aaPredicted RBP11.01□□□□□ -0.65
SS18-225ENST00000585121 ADGRG3Q86Y34 549 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 ZNF100Q8IYN0 542 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 SLC38A5Q8WUX1 472 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 SPDL1Q96EA4 605 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 AURKBQ96GD4 344 aaPredicted RBP11.01□□□□□ -0.65
SS18-225ENST00000585121 MAGEB18Q96M61 343 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 PSD2Q9BQI7 771 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 NGBQ9NPG2 151 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 TMEM45AQ9NWC5 275 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 BEX4Q9NWD9 120 aaPredicted RBP11.01□□□□□ -0.65
SS18-225ENST00000585121 IFT52Q9Y366 437 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 TMED7Q9Y3B3 224 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 PCDHB14Q9Y5E9 798 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 ITPR3Q14573 2671 aa11.01□□□□□ -0.65
SS18-225ENST00000585121 NR5A2O00482 541 aa11□□□□□ -0.65
SS18-225ENST00000585121 AP3D1O14617 1153 aa11□□□□□ -0.65
SS18-225ENST00000585121 SMAD9O15198 467 aaKnown RBP11□□□□□ -0.65
SS18-225ENST00000585121 EIF1BO60739 113 aaKnown RBP11□□□□□ -0.65
SS18-225ENST00000585121 TFPTP0C1Z6 253 aa11□□□□□ -0.65
SS18-225ENST00000585121 CCNA2P20248 432 aa11□□□□□ -0.65
SS18-225ENST00000585121 PPIBP23284 216 aaKnown RBP11□□□□□ -0.65
SS18-225ENST00000585121 CXCR1P25024 350 aa11□□□□□ -0.65
SS18-225ENST00000585121 OR3A2P47893 321 aa11□□□□□ -0.65
SS18-225ENST00000585121 ATP4BP51164 291 aa11□□□□□ -0.65
SS18-225ENST00000585121 MVDP53602 400 aa11□□□□□ -0.65
SS18-225ENST00000585121 EPS8Q12929 822 aa11□□□□□ -0.65
SS18-225ENST00000585121 P2RY6Q15077 328 aa11□□□□□ -0.65
SS18-225ENST00000585121 PDK3Q15120 406 aa11□□□□□ -0.65
SS18-225ENST00000585121 RGNQ15493 299 aa11□□□□□ -0.65
SS18-225ENST00000585121 GTDC1Q4AE62 458 aa11□□□□□ -0.65
SS18-225ENST00000585121 ALKBH2Q6NS38 261 aa11□□□□□ -0.65
SS18-225ENST00000585121 BLOC1S3Q6QNY0 202 aa11□□□□□ -0.65
SS18-225ENST00000585121 VRK2Q86Y07 508 aa11□□□□□ -0.65
SS18-225ENST00000585121 WFDC8Q8IUA0 241 aa11□□□□□ -0.65
SS18-225ENST00000585121 PIGXQ8TBF5 258 aa11□□□□□ -0.65
SS18-225ENST00000585121 CKAP2Q8WWK9 683 aa11□□□□□ -0.65
SS18-225ENST00000585121 KISS1RQ969F8 398 aaPredicted RBP11□□□□□ -0.65
SS18-225ENST00000585121 PIGTQ969N2 578 aa11□□□□□ -0.65
SS18-225ENST00000585121 ZNF775Q96BV0 537 aaPredicted RBP11□□□□□ -0.65
SS18-225ENST00000585121 TMEM19Q96HH6 336 aa11□□□□□ -0.65
SS18-225ENST00000585121 EBF4Q9BQW3 602 aa11□□□□□ -0.65
SS18-225ENST00000585121 NAA11Q9BSU3 229 aaPredicted RBP11□□□□□ -0.65
SS18-225ENST00000585121 PAIP1Q9H074 479 aaKnown RBP11□□□□□ -0.65
SS18-225ENST00000585121 RABEP2Q9H5N1 569 aa11□□□□□ -0.65
SS18-225ENST00000585121 UBTD1Q9HAC8 227 aa11□□□□□ -0.65
SS18-225ENST00000585121 CCDC167Q9P0B6 97 aa11□□□□□ -0.65
SS18-225ENST00000585121 TMEM181Q9P2C4 612 aa11□□□□□ -0.65
SS18-225ENST00000585121 TRAPPC4Q9Y296 219 aa11□□□□□ -0.65
SS18-225ENST00000585121 ZNF443Q9Y2A4 671 aaPredicted RBP11□□□□□ -0.65
SS18-225ENST00000585121 HRNRQ86YZ3 2850 aaPredicted RBP11□□□□□ -0.65
SS18-225ENST00000585121 HEATR5AQ86XA9 2040 aa11□□□□□ -0.65
SS18-225ENST00000585121 CDHR4A6H8M9 788 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 GPR171O14626 319 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 SIAH2O43255 324 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 ZNF208O43345 1280 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 ADAP00813 363 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 THBS1P07996 1170 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 CD99P14209 185 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 CD53P19397 219 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 NCF2P19878 526 aaPredicted RBP10.99□□□□□ -0.65
SS18-225ENST00000585121 TACR3P29371 465 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 GUCY1A3Q02108 690 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 ITGADQ13349 1161 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 SQLEQ14534 574 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 ACKR1Q16570 336 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 AGKQ53H12 422 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 SFRP5Q5T4F7 317 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 PRAMEF8Q5VWM4 474 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 PRAMEF7Q5VXH5 474 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 C20orf204Q6ZNR8 217 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 Q6ZT83 130 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 TGIF2LYQ8IUE0 185 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 GABRG1Q8N1C3 465 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 BBS10Q8TAM1 723 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 HSD17B8Q92506 261 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 S100PBPQ96BU1 408 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 ARL5BQ96KC2 179 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 OR11A1Q9GZK7 315 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms