RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 KLK2P20151 261 aa18.18■□□□□ 0.5
SS18-224ENST00000584083 PPIBP23284 216 aaKnown RBP18.18■□□□□ 0.5
SS18-224ENST00000584083 DNASE1P24855 282 aa18.18■□□□□ 0.5
SS18-224ENST00000584083 FKBP2P26885 142 aaKnown RBP18.18■□□□□ 0.5
SS18-224ENST00000584083 POLR2HP52434 150 aaKnown RBP18.18■□□□□ 0.5
SS18-224ENST00000584083 ART1P52961 327 aa18.18■□□□□ 0.5
SS18-224ENST00000584083 EPS8Q12929 822 aa18.18■□□□□ 0.5
SS18-224ENST00000584083 STAC2Q6ZMT1 411 aa18.18■□□□□ 0.5
SS18-224ENST00000584083 STON2Q8WXE9 905 aa18.18■□□□□ 0.5
SS18-224ENST00000584083 NINJ1Q92982 152 aa18.18■□□□□ 0.5
SS18-224ENST00000584083 MAL2Q969L2 176 aa18.18■□□□□ 0.5
SS18-224ENST00000584083 OR11A1Q9GZK7 315 aa18.18■□□□□ 0.5
SS18-224ENST00000584083 ARMC7Q9H6L4 198 aa18.18■□□□□ 0.5
SS18-224ENST00000584083 A4GALTQ9NPC4 353 aa18.18■□□□□ 0.5
SS18-224ENST00000584083 SLC52A3Q9NQ40 469 aa18.18■□□□□ 0.5
SS18-224ENST00000584083 CCM2LQ9NUG4 571 aaPredicted RBP18.18■□□□□ 0.5
SS18-224ENST00000584083 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.18■□□□□ 0.5
SS18-224ENST00000584083 PLEKHA6Q9Y2H5 1048 aa18.18■□□□□ 0.5
SS18-224ENST00000584083 HDGFL3Q9Y3E1 203 aa18.18■□□□□ 0.5
SS18-224ENST00000584083 A0A0G2JND7 137 aa18.17■□□□□ 0.5
SS18-224ENST00000584083 A0A1W2PP18 115 aa18.17■□□□□ 0.5
SS18-224ENST00000584083 FAAHO00519 579 aa18.17■□□□□ 0.5
SS18-224ENST00000584083 THBS1P07996 1170 aa18.17■□□□□ 0.5
SS18-224ENST00000584083 BMP2P12643 396 aa18.17■□□□□ 0.5
SS18-224ENST00000584083 CRYGSP22914 178 aa18.17■□□□□ 0.5
SS18-224ENST00000584083 TACR3P29371 465 aa18.17■□□□□ 0.5
SS18-224ENST00000584083 SLC1A3P43003 542 aa18.17■□□□□ 0.5
SS18-224ENST00000584083 CLK1P49759 484 aaKnown RBP18.17■□□□□ 0.5
SS18-224ENST00000584083 ZSWIM7Q19AV6 140 aa18.17■□□□□ 0.5
SS18-224ENST00000584083 MSRB3Q8IXL7 192 aa18.17■□□□□ 0.5
SS18-224ENST00000584083 ZNF775Q96BV0 537 aaPredicted RBP18.17■□□□□ 0.5
SS18-224ENST00000584083 ARL5BQ96KC2 179 aa18.17■□□□□ 0.5
SS18-224ENST00000584083 PSD2Q9BQI7 771 aa18.17■□□□□ 0.5
SS18-224ENST00000584083 BCO1Q9HAY6 547 aa18.17■□□□□ 0.5
SS18-224ENST00000584083 VAPAQ9P0L0 249 aa18.17■□□□□ 0.5
SS18-224ENST00000584083 OSGIN1Q9UJX0 560 aa18.17■□□□□ 0.5
SS18-224ENST00000584083 IFT52Q9Y366 437 aa18.17■□□□□ 0.5
SS18-224ENST00000584083 PMS2P2O95744 297 aa18.16■□□□□ 0.5
SS18-224ENST00000584083 CD1EP15812 388 aa18.16■□□□□ 0.5
SS18-224ENST00000584083 PPP3CBP16298 524 aa18.16■□□□□ 0.5
SS18-224ENST00000584083 OR2B6P58173 313 aa18.16■□□□□ 0.5
SS18-224ENST00000584083 COPZ1P61923 177 aa18.16■□□□□ 0.5
SS18-224ENST00000584083 TESK1Q15569 626 aa18.16■□□□□ 0.5
SS18-224ENST00000584083 ZNF311Q5JNZ3 666 aa18.16■□□□□ 0.5
SS18-224ENST00000584083 GCNT6Q5T4J0 391 aa18.16■□□□□ 0.5
SS18-224ENST00000584083 RNF220Q5VTB9 566 aa18.16■□□□□ 0.5
SS18-224ENST00000584083 PRAMEF8Q5VWM4 474 aa18.16■□□□□ 0.5
SS18-224ENST00000584083 PRAMEF7Q5VXH5 474 aa18.16■□□□□ 0.5
SS18-224ENST00000584083 TFAP2EQ6VUC0 442 aa18.16■□□□□ 0.5
SS18-224ENST00000584083 MTDHQ86UE4 582 aaKnown RBP18.16■□□□□ 0.5
SS18-224ENST00000584083 CLIP4Q8N3C7 705 aa18.16■□□□□ 0.5
SS18-224ENST00000584083 CADM2Q8N3J6 435 aa18.16■□□□□ 0.5
SS18-224ENST00000584083 BBS10Q8TAM1 723 aa18.16■□□□□ 0.5
SS18-224ENST00000584083 DDIT4LQ96D03 193 aa18.16■□□□□ 0.5
SS18-224ENST00000584083 PIK3IP1Q96FE7 263 aa18.16■□□□□ 0.5
SS18-224ENST00000584083 ZNF300Q96RE9 604 aaPredicted RBP18.16■□□□□ 0.5
SS18-224ENST00000584083 SIKE1Q9BRV8 207 aa18.16■□□□□ 0.5
SS18-224ENST00000584083 SPATA9Q9BWV2 254 aa18.16■□□□□ 0.5
SS18-224ENST00000584083 PLEKHF2Q9H8W4 249 aa18.16■□□□□ 0.5
SS18-224ENST00000584083 BCL2L10Q9HD36 194 aa18.16■□□□□ 0.5
SS18-224ENST00000584083 ZNF446Q9NWS9 450 aa18.16■□□□□ 0.5
SS18-224ENST00000584083 GPR52Q9Y2T5 361 aa18.16■□□□□ 0.5
SS18-224ENST00000584083 TMEM72A0PK05 275 aa18.15■□□□□ 0.5
SS18-224ENST00000584083 DEFB108AA8MXU0 73 aa18.15■□□□□ 0.5
SS18-224ENST00000584083 EVPLLA8MZ36 301 aa18.15■□□□□ 0.5
SS18-224ENST00000584083 PGM3O95394 542 aa18.15■□□□□ 0.5
SS18-224ENST00000584083 PAMR1Q6UXH9 720 aa18.15■□□□□ 0.5
SS18-224ENST00000584083 C22orf34Q6ZV56 151 aa18.15■□□□□ 0.5
SS18-224ENST00000584083 CXorf67Q86X51 503 aaPredicted RBP18.15■□□□□ 0.5
SS18-224ENST00000584083 NFKBIDQ8NI38 313 aa18.15■□□□□ 0.5
SS18-224ENST00000584083 ACTR6Q9GZN1 396 aa18.15■□□□□ 0.5
SS18-224ENST00000584083 TMEM181Q9P2C4 612 aa18.15■□□□□ 0.5
SS18-224ENST00000584083 LEF1Q9UJU2 399 aaPredicted RBP18.15■□□□□ 0.5
SS18-224ENST00000584083 ING1Q9UK53 422 aaPredicted RBP18.15■□□□□ 0.5
SS18-224ENST00000584083 CORO2BQ9UQ03 480 aa18.15■□□□□ 0.5
SS18-224ENST00000584083 SIAH2O43255 324 aa18.14■□□□□ 0.49
SS18-224ENST00000584083 ZNF208O43345 1280 aa18.14■□□□□ 0.49
SS18-224ENST00000584083 RAF1P04049 648 aa18.14■□□□□ 0.49
SS18-224ENST00000584083 ARAFP10398 606 aa18.14■□□□□ 0.49
SS18-224ENST00000584083 PRG2P13727 222 aa18.14■□□□□ 0.49
SS18-224ENST00000584083 PSMB1P20618 241 aaKnown RBP18.14■□□□□ 0.49
SS18-224ENST00000584083 CXCR1P25024 350 aa18.14■□□□□ 0.49
SS18-224ENST00000584083 ACAA2P42765 397 aaKnown RBP18.14■□□□□ 0.49
SS18-224ENST00000584083 MAP2K6P52564 334 aa18.14■□□□□ 0.49
SS18-224ENST00000584083 KEAP1Q14145 624 aa18.14■□□□□ 0.49
SS18-224ENST00000584083 WBP2NLQ6ICG8 309 aa18.14■□□□□ 0.49
SS18-224ENST00000584083 GABRG1Q8N1C3 465 aa18.14■□□□□ 0.49
SS18-224ENST00000584083 STEAP2Q8NFT2 490 aa18.14■□□□□ 0.49
SS18-224ENST00000584083 HDHD5Q9BXW7 423 aa18.14■□□□□ 0.49
SS18-224ENST00000584083 ADAM19Q9H013 955 aa18.14■□□□□ 0.49
SS18-224ENST00000584083 ZNF385DQ9H6B1 395 aa18.14■□□□□ 0.49
SS18-224ENST00000584083 EMC3Q9P0I2 261 aa18.14■□□□□ 0.49
SS18-224ENST00000584083 TRAPPC4Q9Y296 219 aa18.14■□□□□ 0.49
SS18-224ENST00000584083 NDUFAF1Q9Y375 327 aa18.14■□□□□ 0.49
SS18-224ENST00000584083 AKAP9Q99996 3911 aa18.14■□□□□ 0.49
SS18-224ENST00000584083 TRBV5-3A0A0A0MS03 114 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 A0A1W2PPR1 153 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 ZNF724A8MTY0 619 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 ANGPT2O15123 496 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 DNPH1O43598 174 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms