RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 TICAM2Q86XR7 235 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 BPIFB2Q8N4F0 458 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 WDR36Q8NI36 951 aaKnown RBP2.27□□□□□ -2.05
COPS3-217ENST00000583160 BLOC1S5Q8TDH9 187 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 MBOAT4Q96T53 435 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 TXN2Q99757 166 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 CHRDL1Q9BU40 450 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 PORCNQ9H237 461 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 C11orf49Q9H6J7 331 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 NARFLQ9H6Q4 476 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 CAB39LQ9H9S4 337 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 HOXC10Q9NYD6 342 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 ANKMY1Q9P2S6 941 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 SAMD4AQ9UPU9 718 aaKnown RBP2.27□□□□□ -2.05
COPS3-217ENST00000583160 IFT52Q9Y366 437 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 MYO9BQ13459 2157 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 BAZ2AQ9UIF9 1905 aaKnown RBP2.27□□□□□ -2.05
COPS3-217ENST00000583160 MYH4Q9Y623 1939 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 KRTAP4-16G5E9R7 235 aaPredicted RBP2.26□□□□□ -2.05
COPS3-217ENST00000583160 ZNF264O43296 627 aa2.26□□□□□ -2.05
COPS3-217ENST00000583160 SLC25A27O95847 323 aa2.26□□□□□ -2.05
COPS3-217ENST00000583160 IGHV4-34P06331 123 aa2.26□□□□□ -2.05
COPS3-217ENST00000583160 CCNCP24863 283 aa2.26□□□□□ -2.05
COPS3-217ENST00000583160 COPB2P35606 906 aa2.26□□□□□ -2.05
COPS3-217ENST00000583160 RND3P61587 244 aa2.26□□□□□ -2.05
COPS3-217ENST00000583160 HERVK_113P63132 956 aa2.26□□□□□ -2.05
COPS3-217ENST00000583160 ERVK-8P63133 956 aa2.26□□□□□ -2.05
COPS3-217ENST00000583160 IRX3P78415 501 aaPredicted RBP2.26□□□□□ -2.05
COPS3-217ENST00000583160 MRPS6P82932 125 aaKnown RBP2.26□□□□□ -2.05
COPS3-217ENST00000583160 VLDLRP98155 873 aa2.26□□□□□ -2.05
COPS3-217ENST00000583160 PAX5Q02548 391 aa2.26□□□□□ -2.05
COPS3-217ENST00000583160 PPP1R8Q12972 351 aaKnown RBP2.26□□□□□ -2.05
COPS3-217ENST00000583160 PTGES3Q15185 160 aaKnown RBP2.26□□□□□ -2.05
COPS3-217ENST00000583160 LRRC26Q2I0M4 334 aa2.26□□□□□ -2.05
COPS3-217ENST00000583160 CFAP221Q4G0U5 840 aa2.26□□□□□ -2.05
COPS3-217ENST00000583160 NET1Q7Z628 596 aaPredicted RBP2.26□□□□□ -2.05
COPS3-217ENST00000583160 UNC45BQ8IWX7 931 aa2.26□□□□□ -2.05
COPS3-217ENST00000583160 FAM9BQ8IZU0 186 aa2.26□□□□□ -2.05
COPS3-217ENST00000583160 LRRC17Q8N6Y2 441 aa2.26□□□□□ -2.05
COPS3-217ENST00000583160 OR9A1PQ8NGU1 263 aa2.26□□□□□ -2.05
COPS3-217ENST00000583160 ERVK-6Q9BXR3 956 aa2.26□□□□□ -2.05
COPS3-217ENST00000583160 NMNAT2Q9BZQ4 307 aa2.26□□□□□ -2.05
COPS3-217ENST00000583160 NACA2Q9H009 215 aa2.26□□□□□ -2.05
COPS3-217ENST00000583160 NECAP2Q9NVZ3 263 aa2.26□□□□□ -2.05
COPS3-217ENST00000583160 AATFQ9NY61 560 aaKnown RBP eCLIP2.26□□□□□ -2.05
COPS3-217ENST00000583160 SLCO1B1Q9Y6L6 691 aa2.26□□□□□ -2.05
COPS3-217ENST00000583160 MCM3APO60318 1980 aa2.26□□□□□ -2.05
COPS3-217ENST00000583160 SCN10AQ9Y5Y9 1956 aa2.26□□□□□ -2.05
COPS3-217ENST00000583160 LCTP09848 1927 aa2.26□□□□□ -2.05
COPS3-217ENST00000583160 LRRC37A2A6NM11 1700 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 PLIN4Q96Q06 1357 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 LRP4O75096 1905 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 ELP1O95163 1332 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 SPTBN5Q9NRC6 3674 aaKnown RBP2.25□□□□□ -2.05
COPS3-217ENST00000583160 GBF1Q92538 1859 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 IGHV1OR15-1A0A075B7D0 117 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 A0A0U1RQG5 324 aaPredicted RBP2.25□□□□□ -2.05
COPS3-217ENST00000583160 SMIM28A0A1B0GU29 152 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 A0A1W2PRV1 198 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 TTC26A0AVF1 554 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 TMEM89A2RUT3 159 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 A6NDX4 124 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 FBLL1A6NHQ2 334 aaKnown RBP2.25□□□□□ -2.05
COPS3-217ENST00000583160 EFNA2O43921 213 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 NPIPB7O75200 414 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 CXCL14O95715 111 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 CYP2B6P20813 491 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 HPDP32754 393 aaPredicted RBP2.25□□□□□ -2.05
COPS3-217ENST00000583160 GCKP35557 465 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 KIR2DS2P43631 304 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 SUCLG1P53597 346 aaKnown RBP2.25□□□□□ -2.05
COPS3-217ENST00000583160 LIM2P55344 173 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 HERVK_113P61574 105 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 CARTPTQ16568 116 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 ZSWIM7Q19AV6 140 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 AGKQ53H12 422 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 FAM120AOSQ5T036 256 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 C12orf60Q5U649 245 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 MFSD14CQ5VZR4 134 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 DLEU7Q6UYE1 221 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 TMEM179Q6ZVK1 233 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 IFNEQ86WN2 208 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 DEFB123Q8N688 67 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 ARFGAP2Q8N6H7 521 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 TMEM252Q8N6L7 170 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 Q8N9W7 124 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 MDS2Q8NDY4 140 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 TRPV1Q8NER1 839 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 OR9A4Q8NGU2 314 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 SLC17A9Q9BYT1 436 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 KAT8Q9H7Z6 458 aaKnown RBP2.25□□□□□ -2.05
COPS3-217ENST00000583160 VCPKMTQ9H867 229 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 UBQLN1Q9UMX0 589 aaKnown RBP2.25□□□□□ -2.05
COPS3-217ENST00000583160 Q9Y3F1 56 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 WDR45Q9Y484 360 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 TTC28Q96AY4 2481 aa2.25□□□□□ -2.05
COPS3-217ENST00000583160 MROH7Q68CQ1 1323 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms