RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 SLC35A3Q9Y2D2 325 aa9.04□□□□□ -0.96
GGA3-210ENST00000580799 HDGFL3Q9Y3E1 203 aa9.04□□□□□ -0.96
GGA3-210ENST00000580799 PMF1-BGLAPU3KQ54 211 aa9.04□□□□□ -0.96
GGA3-210ENST00000580799 CUBNO60494 3623 aa9.04□□□□□ -0.96
GGA3-210ENST00000580799 YLPM1P49750 1951 aaKnown RBP9.03□□□□□ -0.96
GGA3-210ENST00000580799 M0R1B8 84 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 NDUFS8O00217 210 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 FCMRO60667 390 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 SHBGP04278 402 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 IGHV4-31P0DP07 118 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 MATN1P21941 496 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 APOBEC3AP31941 199 aaPredicted RBP9.03□□□□□ -0.96
GGA3-210ENST00000580799 SOAT1P35610 550 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 SERPINB5P36952 375 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 MAGEA8P43361 318 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 GZMKP49863 264 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 TGFBR3Q03167 851 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 SPOCK1Q08629 439 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 MAD2L1Q13257 205 aaPredicted RBP9.03□□□□□ -0.96
GGA3-210ENST00000580799 IL23RQ5VWK5 629 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 AP1ARQ63HQ0 302 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 B3GLCTQ6Y288 498 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 C16orf62Q7Z3J2 963 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 GRINAQ7Z429 371 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 C6orf120Q7Z4R8 191 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 C4orf33Q8N1A6 199 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 KRTCAP2Q8N6L1 136 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 EIF1ADQ8N9N8 165 aaKnown RBP9.03□□□□□ -0.96
GGA3-210ENST00000580799 FNDC5Q8NAU1 212 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 FAM71CQ8NEG0 241 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 C1orf162Q8NEQ5 155 aaPredicted RBP9.03□□□□□ -0.96
GGA3-210ENST00000580799 MIPOL1Q8TD10 442 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 HTRA1Q92743 480 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 C1orf50Q9BV19 199 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 CCDC106Q9BWC9 280 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 MANSC1Q9H8J5 431 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 POLE3Q9NRF9 147 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 PARPBPQ9NWS1 579 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 MKS1Q9NXB0 559 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 GIMAP2Q9UG22 337 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 DCTN4Q9UJW0 460 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 MKLN1Q9UL63 735 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 TRAPPC4Q9Y296 219 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 AMDHD2Q9Y303 409 aa9.03□□□□□ -0.96
GGA3-210ENST00000580799 SMIM23A6NLE4 172 aa9.02□□□□□ -0.97
GGA3-210ENST00000580799 KIAA0513O60268 411 aa9.02□□□□□ -0.97
GGA3-210ENST00000580799 LMX1BO60663 402 aa9.02□□□□□ -0.97
GGA3-210ENST00000580799 EIF1BO60739 113 aaKnown RBP9.02□□□□□ -0.97
GGA3-210ENST00000580799 SLU7O95391 586 aaKnown RBP9.02□□□□□ -0.97
GGA3-210ENST00000580799 C8BP07358 591 aa9.02□□□□□ -0.97
GGA3-210ENST00000580799 ITGA5P08648 1049 aa9.02□□□□□ -0.97
GGA3-210ENST00000580799 ZNF16P17020 682 aaPredicted RBP9.02□□□□□ -0.97
GGA3-210ENST00000580799 HNF1AP20823 631 aa9.02□□□□□ -0.97
GGA3-210ENST00000580799 ALDH3A1P30838 453 aa9.02□□□□□ -0.97
GGA3-210ENST00000580799 PGM1P36871 562 aa9.02□□□□□ -0.97
GGA3-210ENST00000580799 HTR3AP46098 478 aa9.02□□□□□ -0.97
GGA3-210ENST00000580799 MAP2K6P52564 334 aa9.02□□□□□ -0.97
GGA3-210ENST00000580799 RPS26P62854 115 aaKnown RBP9.02□□□□□ -0.97
GGA3-210ENST00000580799 LSM11P83369 360 aaKnown RBP eCLIP9.02□□□□□ -0.97
GGA3-210ENST00000580799 H3F3AP84243 136 aa9.02□□□□□ -0.97
GGA3-210ENST00000580799 KRTAP24-1Q3LI83 254 aa9.02□□□□□ -0.97
GGA3-210ENST00000580799 ATAD3BQ5T9A4 648 aa9.02□□□□□ -0.97
GGA3-210ENST00000580799 ZNF563Q8TA94 476 aa9.02□□□□□ -0.97
GGA3-210ENST00000580799 UBLCP1Q8WVY7 318 aaPredicted RBP9.02□□□□□ -0.97
GGA3-210ENST00000580799 APOPT1Q96IL0 206 aa9.02□□□□□ -0.97
GGA3-210ENST00000580799 ARL5BQ96KC2 179 aa9.02□□□□□ -0.97
GGA3-210ENST00000580799 SLC35G5Q96KT7 338 aa9.02□□□□□ -0.97
GGA3-210ENST00000580799 SERHL2Q9H4I8 314 aa9.02□□□□□ -0.97
GGA3-210ENST00000580799 EXOSC3Q9NQT5 275 aaKnown RBP9.02□□□□□ -0.97
GGA3-210ENST00000580799 CTPS2Q9NRF8 586 aa9.02□□□□□ -0.97
GGA3-210ENST00000580799 SLC9A8Q9Y2E8 581 aa9.02□□□□□ -0.97
GGA3-210ENST00000580799 WDR45Q9Y484 360 aa9.02□□□□□ -0.97
GGA3-210ENST00000580799 FKBP7Q9Y680 259 aa9.02□□□□□ -0.97
GGA3-210ENST00000580799 NBEAL1Q6ZS30 2694 aa9.02□□□□□ -0.97
GGA3-210ENST00000580799 PLCE1Q9P212 2302 aa9.02□□□□□ -0.97
GGA3-210ENST00000580799 CENPVL1A0A0U1RR11 272 aa9.01□□□□□ -0.97
GGA3-210ENST00000580799 RNF103-CHMP3A0A140T963 221 aa9.01□□□□□ -0.97
GGA3-210ENST00000580799 A0A1W2PR80 420 aa9.01□□□□□ -0.97
GGA3-210ENST00000580799 VWC2LB2RUY7 222 aa9.01□□□□□ -0.97
GGA3-210ENST00000580799 PDLIM1O00151 329 aa9.01□□□□□ -0.97
GGA3-210ENST00000580799 RNASET2O00584 256 aaKnown RBP9.01□□□□□ -0.97
GGA3-210ENST00000580799 SRD5A1P18405 259 aa9.01□□□□□ -0.97
GGA3-210ENST00000580799 NTF4P34130 210 aa9.01□□□□□ -0.97
GGA3-210ENST00000580799 CLDN8P56748 225 aa9.01□□□□□ -0.97
GGA3-210ENST00000580799 PHC1P78364 1004 aa9.01□□□□□ -0.97
GGA3-210ENST00000580799 MAPK14Q16539 360 aa9.01□□□□□ -0.97
GGA3-210ENST00000580799 SMU1Q2TAY7 513 aa9.01□□□□□ -0.97
GGA3-210ENST00000580799 PGS1Q32NB8 556 aa9.01□□□□□ -0.97
GGA3-210ENST00000580799 FAM166AQ6J272 317 aa9.01□□□□□ -0.97
GGA3-210ENST00000580799 CASP12Q6UXS9 341 aa9.01□□□□□ -0.97
GGA3-210ENST00000580799 WDR31Q8NA23 367 aa9.01□□□□□ -0.97
GGA3-210ENST00000580799 OR8J2Q8NGG1 315 aa9.01□□□□□ -0.97
GGA3-210ENST00000580799 AGR3Q8TD06 166 aa9.01□□□□□ -0.97
GGA3-210ENST00000580799 EPS8L3Q8TE67 593 aaKnown RBP9.01□□□□□ -0.97
GGA3-210ENST00000580799 PMM1Q92871 262 aa9.01□□□□□ -0.97
GGA3-210ENST00000580799 TUBGCP3Q96CW5 907 aa9.01□□□□□ -0.97
GGA3-210ENST00000580799 C3orf30Q96M34 536 aa9.01□□□□□ -0.97
GGA3-210ENST00000580799 ZIM3Q96PE6 472 aa9.01□□□□□ -0.97
GGA3-210ENST00000580799 RHOXF2Q9BQY4 288 aa9.01□□□□□ -0.97
GGA3-210ENST00000580799 C19orf24Q9BVV8 132 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms