RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 DNAJC14Q6Y2X3 702 aaPredicted RBP18.86■□□□□ 0.61
CSNK1D-215ENST00000580784 Q6ZT83 130 aa18.86■□□□□ 0.61
CSNK1D-215ENST00000580784 IGFBPL1Q8WX77 278 aa18.86■□□□□ 0.61
CSNK1D-215ENST00000580784 HSD17B8Q92506 261 aa18.86■□□□□ 0.61
CSNK1D-215ENST00000580784 OR11A1Q9GZK7 315 aa18.86■□□□□ 0.61
CSNK1D-215ENST00000580784 LYZL6O75951 148 aa18.85■□□□□ 0.61
CSNK1D-215ENST00000580784 KRT75O95678 551 aa18.85■□□□□ 0.61
CSNK1D-215ENST00000580784 INHBBP09529 407 aa18.85■□□□□ 0.61
CSNK1D-215ENST00000580784 IL7RP16871 459 aa18.85■□□□□ 0.61
CSNK1D-215ENST00000580784 ADSLP30566 484 aaPredicted RBP18.85■□□□□ 0.61
CSNK1D-215ENST00000580784 MVDP53602 400 aa18.85■□□□□ 0.61
CSNK1D-215ENST00000580784 CAPRIN1Q14444 709 aaKnown RBP18.85■□□□□ 0.61
CSNK1D-215ENST00000580784 MAPK11Q15759 364 aa18.85■□□□□ 0.61
CSNK1D-215ENST00000580784 BHLHA15Q7RTS1 189 aaPredicted RBP18.85■□□□□ 0.61
CSNK1D-215ENST00000580784 GALNT5Q7Z7M9 940 aa18.85■□□□□ 0.61
CSNK1D-215ENST00000580784 ATG4DQ86TL0 474 aaPredicted RBP18.85■□□□□ 0.61
CSNK1D-215ENST00000580784 BIVMQ86UB2 503 aa18.85■□□□□ 0.61
CSNK1D-215ENST00000580784 CMIPQ8IY22 773 aa18.85■□□□□ 0.61
CSNK1D-215ENST00000580784 PIWIL2Q8TC59 973 aaKnown RBP18.85■□□□□ 0.61
CSNK1D-215ENST00000580784 WDR60Q8WVS4 1066 aa18.85■□□□□ 0.61
CSNK1D-215ENST00000580784 SDR39U1Q9NRG7 319 aaPredicted RBP18.85■□□□□ 0.61
CSNK1D-215ENST00000580784 TMED7-TICAM2A0A0A6YYA0 188 aa18.84■□□□□ 0.61
CSNK1D-215ENST00000580784 HS3ST1O14792 307 aa18.84■□□□□ 0.61
CSNK1D-215ENST00000580784 UBDO15205 165 aa18.84■□□□□ 0.61
CSNK1D-215ENST00000580784 PMS2P2O95744 297 aa18.84■□□□□ 0.61
CSNK1D-215ENST00000580784 HOXB4P17483 251 aaPredicted RBP18.84■□□□□ 0.61
CSNK1D-215ENST00000580784 RPS4Y1P22090 263 aaKnown RBP18.84■□□□□ 0.61
CSNK1D-215ENST00000580784 GSTA3Q16772 222 aa18.84■□□□□ 0.61
CSNK1D-215ENST00000580784 ABLIM2Q6H8Q1 611 aa18.84■□□□□ 0.61
CSNK1D-215ENST00000580784 Q71RC1 249 aaPredicted RBP18.84■□□□□ 0.61
CSNK1D-215ENST00000580784 YTHDF3Q7Z739 585 aaKnown RBP18.84■□□□□ 0.61
CSNK1D-215ENST00000580784 ZNF100Q8IYN0 542 aa18.84■□□□□ 0.61
CSNK1D-215ENST00000580784 ZNF611Q8N823 705 aa18.84■□□□□ 0.61
CSNK1D-215ENST00000580784 OR9I1Q8NGQ6 314 aa18.84■□□□□ 0.61
CSNK1D-215ENST00000580784 LILRB1Q8NHL6 650 aaPredicted RBP18.84■□□□□ 0.61
CSNK1D-215ENST00000580784 AKAP1Q92667 903 aaKnown RBP eCLIP18.84■□□□□ 0.61
CSNK1D-215ENST00000580784 Q96MF0 132 aa18.84■□□□□ 0.61
CSNK1D-215ENST00000580784 ZIM2Q9NZV7 527 aa18.84■□□□□ 0.61
CSNK1D-215ENST00000580784 OSGIN1Q9UJX0 560 aa18.84■□□□□ 0.61
CSNK1D-215ENST00000580784 TMED7Q9Y3B3 224 aa18.84■□□□□ 0.61
CSNK1D-215ENST00000580784 HDGFL3Q9Y3E1 203 aa18.84■□□□□ 0.61
CSNK1D-215ENST00000580784 IGKV3D-15A0A087WSY6 115 aa18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 ZNF716A6NP11 495 aa18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 KLF11O14901 512 aa18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 ANP32DO95626 131 aa18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 DBIP07108 87 aaKnown RBP18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 ETFAP13804 333 aa18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 IGHV1-2P23083 117 aa18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 FKBP2P26885 142 aaKnown RBP18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 TACR3P29371 465 aa18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 CRATP43155 626 aa18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 HTR3AP46098 478 aa18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 PTH2RP49190 550 aa18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 CLK1P49759 484 aaKnown RBP18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 OR2B6P58173 313 aa18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 PDK3Q15120 406 aa18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 NCMAPQ5T1S8 102 aa18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 MRPL2Q5T653 305 aaKnown RBP18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 PRSS57Q6UWY2 283 aa18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 CCDC103Q8IW40 242 aa18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 CIARTQ8N365 385 aaPredicted RBP18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 TMEM171Q8WVE6 324 aa18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 PMM1Q92871 262 aa18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 VPS33AQ96AX1 596 aa18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 ZHX1-C8orf76Q96EF9 292 aa18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 GSX2Q9BZM3 304 aa18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 NGBQ9NPG2 151 aa18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 RLIMQ9NVW2 624 aa18.83■□□□□ 0.6
CSNK1D-215ENST00000580784 TMEM72A0PK05 275 aa18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 CFAP73A6NFT4 308 aa18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 CLOCKO15516 846 aa18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 RAMP1O60894 148 aa18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 IGHV3-9P01782 118 aa18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 ZCCHC18P0CG32 403 aa18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 NTF4P34130 210 aa18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 POLR2HP52434 150 aaKnown RBP18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 POLR2JP52435 117 aaKnown RBP18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 GNA13Q14344 377 aa18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 STK11Q15831 433 aa18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 GTDC1Q4AE62 458 aa18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 SEZ6L2Q6UXD5 910 aa18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 VRK2Q86Y07 508 aa18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 PEX5LQ8IYB4 626 aa18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 AURKBQ96GD4 344 aaPredicted RBP18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 ITCHQ96J02 903 aa18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 USB1Q9BQ65 265 aaKnown RBP18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 POTEKPQ9BYX7 375 aa18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 ESRP2Q9H6T0 727 aaKnown RBP18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 TPT1P8Q9HAU6 139 aa18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 EMC3Q9P0I2 261 aa18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 TMEM181Q9P2C4 612 aa18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 P2RX2Q9UBL9 471 aa18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 NOSIPQ9Y314 301 aaKnown RBP18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 RNF115Q9Y4L5 304 aa18.82■□□□□ 0.6
CSNK1D-215ENST00000580784 CD3EP07766 207 aa18.81■□□□□ 0.6
CSNK1D-215ENST00000580784 TFPTP0C1Z6 253 aa18.81■□□□□ 0.6
CSNK1D-215ENST00000580784 SLC1A3P43003 542 aa18.81■□□□□ 0.6
CSNK1D-215ENST00000580784 EPS8Q12929 822 aa18.81■□□□□ 0.6
CSNK1D-215ENST00000580784 ADAM5Q6NVV9 412 aa18.81■□□□□ 0.6
CSNK1D-215ENST00000580784 EPGNQ6UW88 154 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms