RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 AENQ8WTP8 325 aaKnown RBP13.42□□□□□ -0.26
CTNS-209ENST00000574776 HS6ST2Q96MM7 605 aa13.42□□□□□ -0.26
CTNS-209ENST00000574776 OR11A1Q9GZK7 315 aa13.42□□□□□ -0.26
CTNS-209ENST00000574776 SAP130Q9H0E3 1048 aa13.42□□□□□ -0.26
CTNS-209ENST00000574776 POLE3Q9NRF9 147 aa13.42□□□□□ -0.26
CTNS-209ENST00000574776 EMC3Q9P0I2 261 aa13.42□□□□□ -0.26
CTNS-209ENST00000574776 CHRNA9Q9UGM1 479 aa13.42□□□□□ -0.26
CTNS-209ENST00000574776 SLC35A3Q9Y2D2 325 aa13.42□□□□□ -0.26
CTNS-209ENST00000574776 RAP2CQ9Y3L5 183 aa13.42□□□□□ -0.26
CTNS-209ENST00000574776 SPIN1Q9Y657 262 aaPredicted RBP13.42□□□□□ -0.26
CTNS-209ENST00000574776 FBN1P35555 2871 aaKnown RBP13.42□□□□□ -0.26
CTNS-209ENST00000574776 PLCE1Q9P212 2302 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 A0A1W2PR80 420 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 PRAMEF27A3QJZ7 478 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 ZNF716A6NP11 495 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 ANKRD28O15084 1053 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 PMS2P2O95744 297 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 TP53P04637 393 aaPredicted RBP13.41□□□□□ -0.26
CTNS-209ENST00000574776 CHI3L1P36222 383 aaPredicted RBP13.41□□□□□ -0.26
CTNS-209ENST00000574776 IDH2P48735 452 aaKnown RBP13.41□□□□□ -0.26
CTNS-209ENST00000574776 RPL14P50914 215 aaKnown RBP13.41□□□□□ -0.26
CTNS-209ENST00000574776 CDH11P55287 796 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 OR2B6P58173 313 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 FUT5Q11128 374 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 CASP8Q14790 479 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 GPAT3Q53EU6 434 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 SPANXN4Q5MJ08 99 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 AP1ARQ63HQ0 302 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 EMBQ6PCB8 327 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 FRRS1Q6ZNA5 592 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 SSX8Q7RTT4 187 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 GRINAQ7Z429 371 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 DTX2Q86UW9 622 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 PIAS4Q8N2W9 510 aaPredicted RBP13.41□□□□□ -0.26
CTNS-209ENST00000574776 ARFGAP2Q8N6H7 521 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 OR52N5Q8NH56 324 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 APH1AQ96BI3 265 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 ZHX1-C8orf76Q96EF9 292 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 NEURL3Q96EH8 262 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 TMEM109Q9BVC6 243 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 GRIP2Q9C0E4 1043 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.41□□□□□ -0.26
CTNS-209ENST00000574776 FAIMQ9NVQ4 179 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 MARCOQ9UEW3 520 aaPredicted RBP13.41□□□□□ -0.26
CTNS-209ENST00000574776 B3GALT5Q9Y2C3 310 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.41□□□□□ -0.26
CTNS-209ENST00000574776 HDGFL3Q9Y3E1 203 aa13.41□□□□□ -0.26
CTNS-209ENST00000574776 HEATR1Q9H583 2144 aaKnown RBP13.4□□□□□ -0.26
CTNS-209ENST00000574776 GPR171O14626 319 aa13.4□□□□□ -0.26
CTNS-209ENST00000574776 BIRC5O15392 142 aa13.4□□□□□ -0.26
CTNS-209ENST00000574776 SSX4O60224 188 aa13.4□□□□□ -0.26
CTNS-209ENST00000574776 MRPL33O75394 65 aaKnown RBP13.4□□□□□ -0.26
CTNS-209ENST00000574776 SLC1A6P48664 564 aa13.4□□□□□ -0.26
CTNS-209ENST00000574776 CLK1P49759 484 aaKnown RBP13.4□□□□□ -0.26
CTNS-209ENST00000574776 KHKP50053 298 aa13.4□□□□□ -0.26
CTNS-209ENST00000574776 ZNF83P51522 516 aa13.4□□□□□ -0.26
CTNS-209ENST00000574776 FOXG1P55316 489 aaPredicted RBP13.4□□□□□ -0.26
CTNS-209ENST00000574776 NME5P56597 212 aa13.4□□□□□ -0.26
CTNS-209ENST00000574776 PLAURQ03405 335 aa13.4□□□□□ -0.26
CTNS-209ENST00000574776 AGAP6Q5VW22 663 aa13.4□□□□□ -0.26
CTNS-209ENST00000574776 DNM1P46Q6ZS02 220 aa13.4□□□□□ -0.26
CTNS-209ENST00000574776 PIGXQ8TBF5 258 aa13.4□□□□□ -0.26
CTNS-209ENST00000574776 OIT3Q8WWZ8 545 aa13.4□□□□□ -0.26
CTNS-209ENST00000574776 CNOT9Q92600 299 aaKnown RBP13.4□□□□□ -0.26
CTNS-209ENST00000574776 TESCQ96BS2 214 aa13.4□□□□□ -0.26
CTNS-209ENST00000574776 RADILQ96JH8 1075 aa13.4□□□□□ -0.26
CTNS-209ENST00000574776 SORT1Q99523 831 aa13.4□□□□□ -0.26
CTNS-209ENST00000574776 SLC35A5Q9BS91 424 aa13.4□□□□□ -0.26
CTNS-209ENST00000574776 C1QTNF6Q9BXI9 259 aa13.4□□□□□ -0.26
CTNS-209ENST00000574776 NUF2Q9BZD4 464 aa13.4□□□□□ -0.26
CTNS-209ENST00000574776 BARX1Q9HBU1 254 aaPredicted RBP13.4□□□□□ -0.26
CTNS-209ENST00000574776 YAE1D1Q9NRH1 226 aa13.4□□□□□ -0.26
CTNS-209ENST00000574776 ASB6Q9NWX5 421 aa13.4□□□□□ -0.26
CTNS-209ENST00000574776 SLC25A15Q9Y619 301 aa13.4□□□□□ -0.26
CTNS-209ENST00000574776 GOLGA8QA0A0J9YX86 632 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 GOLGA8OA6NCC3 632 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 E7EQL1 145 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 GOLGA8NF8WBI6 632 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 HMGN4O00479 90 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 AP3D1O14617 1153 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 LBPP18428 481 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 FKBP2P26885 142 aaKnown RBP13.39□□□□□ -0.27
CTNS-209ENST00000574776 S100A3P33764 101 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 TTKP33981 857 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 MAGEA8P43361 318 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 SYPL1Q16563 259 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 KRT71Q3SY84 523 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 FAM174BQ3ZCQ3 159 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 SLC22A25Q6T423 547 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 TMEM108Q6UXF1 575 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 CXXC5Q7LFL8 322 aaKnown RBP13.39□□□□□ -0.27
CTNS-209ENST00000574776 RNF130Q86XS8 419 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 ANKFN1Q8N957 763 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 OR52E4Q8NGH9 312 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 TEX37Q96LM6 180 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 MUS81Q96NY9 551 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 RHNO1Q9BSD3 238 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 EXOSC3Q9NQT5 275 aaKnown RBP13.39□□□□□ -0.27
CTNS-209ENST00000574776 PNPOQ9NVS9 261 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 TMEM181Q9P2C4 612 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms