RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 MAT2AP31153 395 aaKnown RBP9.94□□□□□ -0.82
CCDC40-207ENST00000572253 POU6F2P78424 691 aaPredicted RBP9.94□□□□□ -0.82
CCDC40-207ENST00000572253 ZNF267Q14586 743 aaPredicted RBP9.94□□□□□ -0.82
CCDC40-207ENST00000572253 PON3Q15166 354 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 CST6Q15828 149 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 USP53Q70EK8 1073 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 SLC35F2Q8IXU6 374 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 IZUMO1Q8IYV9 350 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 HAVCR2Q8TDQ0 301 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 PMM1Q92871 262 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 MFRPQ9BY79 579 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 KIR3DX1Q9H7L2 352 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 KLHL9Q9P2J3 617 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 RCE1Q9Y256 329 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 INSL6Q9Y581 213 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 SESN1Q9Y6P5 492 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 GXYLT2A0PJZ3 443 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 TUBAL3A6NHL2 446 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 PEX12O00623 359 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 GPRIN2O60269 458 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 TGM6O95932 706 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 UCHL1P09936 223 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 SLC2A5P22732 501 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 ID2Q02363 134 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 MTFR2Q6P444 385 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 VITQ6UXI7 678 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 ESPNLQ6ZVH7 1005 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 PRSS45Q7RTY3 260 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 PAQR7Q86WK9 346 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 EID2Q8N6I1 236 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 OR4D9Q8NGE8 314 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 RSPRY1Q96DX4 576 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 LRFN5Q96NI6 719 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 TNFRSF13CQ96RJ3 184 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 RBCK1Q9BYM8 510 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 GSX2Q9BZM3 304 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 CHIAQ9BZP6 476 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 TRIM2Q9C040 744 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 SLITRK2Q9H156 845 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 RDH8Q9NYR8 311 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 USP36Q9P275 1121 aaKnown RBP9.94□□□□□ -0.82
CCDC40-207ENST00000572253 FKBP7Q9Y680 259 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 MYO7AQ13402 2215 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 TYRP1P17643 537 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 RPS4Y1P22090 263 aaKnown RBP9.93□□□□□ -0.82
CCDC40-207ENST00000572253 PEBP1P30086 187 aaKnown RBP9.93□□□□□ -0.82
CCDC40-207ENST00000572253 DRD3P35462 400 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 NAA10P41227 235 aaPredicted RBP9.93□□□□□ -0.82
CCDC40-207ENST00000572253 EPHA4P54764 986 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 RPL6Q02878 288 aaKnown RBP9.93□□□□□ -0.82
CCDC40-207ENST00000572253 AANATQ16613 207 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 DEFB115Q30KQ5 88 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 AGBL4Q5VU57 503 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 FIGNL1Q6PIW4 674 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 VN1R4Q7Z5H5 301 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 SYT9Q86SS6 491 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 OR6V1Q8N148 313 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 ZNF433Q8N7K0 673 aaPredicted RBP9.93□□□□□ -0.82
CCDC40-207ENST00000572253 OR51Q1Q8NH59 317 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 NT5CQ8TCD5 201 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 SMAP2Q8WU79 429 aaPredicted RBP9.93□□□□□ -0.82
CCDC40-207ENST00000572253 FCAMRQ8WWV6 532 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 STACQ99469 402 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 SRMSQ9H3Y6 488 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 MRPL15Q9P015 296 aaKnown RBP9.93□□□□□ -0.82
CCDC40-207ENST00000572253 THAP10Q9P2Z0 257 aaPredicted RBP9.93□□□□□ -0.82
CCDC40-207ENST00000572253 PPIEQ9UNP9 301 aaKnown RBP9.93□□□□□ -0.82
CCDC40-207ENST00000572253 ANKRD61A6NGH8 418 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 HYAL3O43820 417 aaPredicted RBP9.93□□□□□ -0.82
CCDC40-207ENST00000572253 SERPINI2O75830 405 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 ADH1BP00325 375 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 TFP02787 698 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 CCL5P13501 91 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 RPL4P36578 427 aaKnown RBP9.93□□□□□ -0.82
CCDC40-207ENST00000572253 WASP42768 502 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 CRYZQ08257 329 aaKnown RBP9.93□□□□□ -0.82
CCDC40-207ENST00000572253 TRMT12Q53H54 448 aaKnown RBP9.93□□□□□ -0.82
CCDC40-207ENST00000572253 ZCCHC12Q6PEW1 402 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 ABHD13Q7L211 337 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 NLRC3Q7RTR2 1065 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 SFTPA1Q8IWL2 248 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 C15orf40Q8WUR7 153 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 PEX11GQ96HA9 241 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 OR14A2Q96R54 314 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 OR10A4Q9H209 315 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 AUNIPQ9H7T9 357 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 MGAT4CQ9UBM8 478 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 A0A1B0GUH1 482 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 ZNF749O43361 778 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 PTP4A3O75365 173 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 MRPS10P82664 201 aaKnown RBP9.93□□□□□ -0.82
CCDC40-207ENST00000572253 TAGLNQ01995 201 aaKnown RBP9.93□□□□□ -0.82
CCDC40-207ENST00000572253 PUDPQ08623 228 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 COL9A2Q14055 689 aaPredicted RBP9.93□□□□□ -0.82
CCDC40-207ENST00000572253 NUDT18Q6ZVK8 323 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 CMTM4Q8IZR5 234 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 CAMKVQ8NCB2 501 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 FAM71CQ8NEG0 241 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 C7orf57Q8NEG2 295 aa9.93□□□□□ -0.82
CCDC40-207ENST00000572253 OR4K13Q8NH42 304 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms