RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 ALDH6A1Q02252 535 aaKnown RBP5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 SLC34A1Q06495 639 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 RIPK1Q13546 671 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 DGCR6Q14129 220 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 INPP5JQ15735 1006 aaPredicted RBP5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 SNCBQ16143 134 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 EXOC3L2Q2M3D2 409 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 PLPPR5Q32ZL2 321 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 SLC6A19Q695T7 634 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 TTC33Q6PID6 262 aaPredicted RBP5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 C19orf48Q6RUI8 117 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 C5orf46Q6UWT4 87 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 ARSKQ6UWY0 536 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 Q6ZS92 163 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 GDF7Q7Z4P5 450 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 AMIGO2Q86SJ2 522 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 ZNF605Q86T29 641 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 HIPK1Q86Z02 1210 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 CDK20Q8IZL9 346 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 FAM109AQ8N4B1 249 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 LINC00471Q8N535 108 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 C10orf53Q8N6V4 93 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 WDSUB1Q8N9V3 476 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 TEX19Q8NA77 164 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 ATG16L2Q8NAA4 619 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 ZFP62Q8NB50 900 aaPredicted RBP5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 FAM83FQ8NEG4 500 aaPredicted RBP5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 OR10G2Q8NGC3 310 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 PIGXQ8TBF5 258 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 GPR119Q8TDV5 335 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 EDARADDQ8WWZ3 215 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 ACOT11Q8WXI4 607 aaPredicted RBP5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 SMPDL3BQ92485 455 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 PNPLA2Q96AD5 504 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 C3orf49Q96BT1 292 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 CRELD1Q96HD1 420 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 HS6ST2Q96MM7 605 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 ALPK1Q96QP1 1244 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 PKP2Q99959 881 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 C9orf16Q9BUW7 83 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 KLHL4Q9C0H6 718 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 PRORYQ9H606 182 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 C12orf10Q9HB07 376 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 ACER3Q9NUN7 267 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 QPCTLQ9NXS2 382 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 FRRS1LQ9P0K9 344 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 LUZP4Q9P127 313 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 CHRNA9Q9UGM1 479 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 ENOPH1Q9UHY7 261 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 ACAD8Q9UKU7 415 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 OAZ3Q9UMX2 235 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 A4GNTQ9UNA3 340 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 TMEM5Q9Y2B1 443 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 NTNG1Q9Y2I2 539 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 TMED7Q9Y3B3 224 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 MED31Q9Y3C7 131 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 LYVE1Q9Y5Y7 322 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 C7orf72A4D263 438 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 PINLYPA6NC86 204 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 G3V2T6 193 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 LINC01387J3KSC0 135 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 EREGO14944 169 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 SEC14L5O43304 696 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 ADAM11O75078 769 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 HPNP05981 417 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 SAGP10523 405 aaPredicted RBP5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 PEPDP12955 493 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 CDH2P19022 906 aaPredicted RBP5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 PTNP21246 168 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 FKBP2P26885 142 aaKnown RBP5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 MAP2K6P52564 334 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 NUP107P57740 925 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 PMP22Q01453 160 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 IL1RL1Q01638 556 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 CRYZQ08257 329 aaKnown RBP5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 FOXO1Q12778 655 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 KLRB1Q12918 225 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 TOMM34Q15785 309 aaPredicted RBP5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 GLYR1Q49A26 553 aaPredicted RBP5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 WIPI1Q5MNZ9 446 aaPredicted RBP5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 OTUD3Q5T2D3 398 aaPredicted RBP5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 PDSS1Q5T2R2 415 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 FBXW10Q5XX13 1052 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 SHQ1Q6PI26 577 aaKnown RBP5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 MBOAT2Q6ZWT7 520 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 ATG4DQ86TL0 474 aaPredicted RBP5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 YRDCQ86U90 279 aaKnown RBP5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 STK32CQ86UX6 486 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 GTPBP8Q8N3Z3 284 aaPredicted RBP5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 TMEM251Q8N6I4 163 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 ATP6V1C2Q8NEY4 427 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 OR4K5Q8NGD3 323 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 OR5K1Q8NHB7 308 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 GIPC3Q8TF64 312 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 TMEM255BQ8WV15 326 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 TMEM239Q8WW34 195 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 DNAJC9Q8WXX5 260 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 ZHX1-C8orf76Q96EF9 292 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 DHRS1Q96LJ7 313 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms