RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 LSM11P83369 360 aaKnown RBP eCLIP13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 ZNF169Q14929 603 aaPredicted RBP13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 RAET1LQ5VY80 246 aa13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 ANKRD34AQ69YU3 496 aa13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 PPP4R4Q6NUP7 873 aa13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 PGBD2Q6P3X8 592 aa13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 P3H2Q8IVL5 708 aa13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 PACRGLQ8N7B6 248 aa13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 FAM98AQ8NCA5 519 aaKnown RBP13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 OR5M1Q8NGP8 315 aa13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 PFN4Q8NHR9 129 aa13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 POC1BQ8TC44 478 aa13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 SLC39A7Q92504 469 aa13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 ABHD17AQ96GS6 310 aa13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 FEVQ99581 238 aa13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 NPAS1Q99742 590 aa13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 PSD2Q9BQI7 771 aa13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 TACO1Q9BSH4 297 aaKnown RBP13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 ZNF426Q9BUY5 554 aa13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 USE1Q9NZ43 259 aa13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 TP53TG5Q9Y2B4 290 aa13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 MED31Q9Y3C7 131 aa13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 HEATR5AQ86XA9 2040 aa13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 MGAQ8IWI9 3026 aa13.96□□□□□ -0.17
HERPUD1-219ENST00000570273 IGKV1D-42A0A075B6H8 117 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 TMEM72A0PK05 275 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 K7EM74 188 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 ACOT7O00154 380 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 TRAPPC6AO75865 159 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 WISP1O95388 367 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 HPRP00739 348 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 ANXA8P13928 327 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 CBLP22681 906 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 IGFBP5P24593 272 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 APOBEC1P41238 236 aaKnown RBP13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 ALDH3A2P51648 485 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 PPP2R2BQ00005 443 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 IL1RL1Q01638 556 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 ZNF770Q6IQ21 691 aaPredicted RBP13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 FAHD1Q6P587 224 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 IZUMO2Q6UXV1 221 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 LINC00114Q6XXX2 140 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 YRDCQ86U90 279 aaKnown RBP13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 GTPBP8Q8N3Z3 284 aaPredicted RBP13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 ZFP62Q8NB50 900 aaPredicted RBP13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 OR14L1PQ8NHC6 308 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 MAGEE2Q8TD90 523 aaPredicted RBP13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 CRELD1Q96HD1 420 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 FAM46AQ96IP4 442 aaKnown RBP13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 ARHGAP9Q9BRR9 750 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 TMEM43Q9BTV4 400 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 OSBPL10Q9BXB5 764 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 MFRPQ9BY79 579 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 OR2B2Q9GZK3 357 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 UBQLN3Q9H347 655 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 ZNF556Q9HAH1 456 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 CHRNA9Q9UGM1 479 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 MGAT4BQ9UQ53 548 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 ORC6Q9Y5N6 252 aa13.96□□□□□ -0.18
HERPUD1-219ENST00000570273 CNTRLQ7Z7A1 2325 aa13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 C7orf72A4D263 438 aa13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 ENO4A6NNW6 628 aa13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 GLSO94925 669 aaPredicted RBP13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 ADAP00813 363 aa13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 ALPLP05186 524 aa13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 IFI30P13284 250 aa13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 ZNF17P17021 662 aa13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 ZNF26P17031 533 aaPredicted RBP13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 GPR4P46093 362 aa13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 DAPP51397 102 aa13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 PPIAP62937 165 aaKnown RBP13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 FOXK1P85037 733 aa13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 PMP22Q01453 160 aa13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 ALDH6A1Q02252 535 aaKnown RBP13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 CRYZQ08257 329 aaKnown RBP13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.95□□□□□ -0.185e-6■■□□□ 11.7
HERPUD1-219ENST00000570273 ASB18Q6ZVZ8 466 aa13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 ZER1Q7Z7L7 766 aa13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 SLC22A16Q86VW1 577 aa13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 MEX3DQ86XN8 651 aaKnown RBP13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 ADGRG3Q86Y34 549 aa13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 RNF113BQ8IZP6 322 aaKnown RBP13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 TMEM251Q8N6I4 163 aa13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 RBMXL3Q8N7X1 1067 aaKnown RBP13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 FAM83FQ8NEG4 500 aaPredicted RBP13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 C9orf43Q8TAL5 461 aaPredicted RBP13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 GTPBP3Q969Y2 492 aaKnown RBP13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 DGCR6LQ9BY27 220 aa13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 SLC19A3Q9BZV2 496 aa13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 SERINC1Q9NRX5 453 aa13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 TMEM5Q9Y2B1 443 aa13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 SPIN1Q9Y657 262 aaPredicted RBP13.95□□□□□ -0.18
HERPUD1-219ENST00000570273 OR2M5A3KFT3 312 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 ZIC3O60481 467 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 GASTP01350 101 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 FAM87AP0C7U9 286 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 POU2F1P14859 743 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 ELK4P28324 431 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 ADH6P28332 368 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 MAGEA5P43359 124 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms