RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 ZNF337Q9Y3M9 751 aa21.18■□□□□ 0.98
RAB40C-212ENST00000569575 DEAF1O75398 565 aaPredicted RBP21.17■□□□□ 0.98
RAB40C-212ENST00000569575 HOXD4P09016 255 aaPredicted RBP21.17■□□□□ 0.98
RAB40C-212ENST00000569575 BMP7P18075 431 aa21.17■□□□□ 0.98
RAB40C-212ENST00000569575 TTC33Q6PID6 262 aaPredicted RBP21.17■□□□□ 0.98
RAB40C-212ENST00000569575 LILRA2Q8N149 483 aa21.17■□□□□ 0.98
RAB40C-212ENST00000569575 MEIOBQ8N635 442 aa21.17■□□□□ 0.98
RAB40C-212ENST00000569575 STMN2Q93045 179 aa21.17■□□□□ 0.98
RAB40C-212ENST00000569575 KLHDC3Q9BQ90 382 aa21.17■□□□□ 0.98
RAB40C-212ENST00000569575 KLHL4Q9C0H6 718 aa21.17■□□□□ 0.98
RAB40C-212ENST00000569575 DNAJB9Q9UBS3 223 aa21.17■□□□□ 0.98
RAB40C-212ENST00000569575 SLC7A7Q9UM01 511 aa21.17■□□□□ 0.98
RAB40C-212ENST00000569575 TRAPPC4Q9Y296 219 aa21.17■□□□□ 0.98
RAB40C-212ENST00000569575 DNAJC13O75165 2243 aa21.17■□□□□ 0.98
RAB40C-212ENST00000569575 ATMQ13315 3056 aa21.17■□□□□ 0.98
RAB40C-212ENST00000569575 ATRXP46100 2492 aa21.16■□□□□ 0.98
RAB40C-212ENST00000569575 FFAR1O14842 300 aa21.16■□□□□ 0.98
RAB40C-212ENST00000569575 DNPH1O43598 174 aa21.16■□□□□ 0.98
RAB40C-212ENST00000569575 OR2T1O43869 369 aa21.16■□□□□ 0.98
RAB40C-212ENST00000569575 CST1P01037 141 aa21.16■□□□□ 0.98
RAB40C-212ENST00000569575 ZNF708P17019 499 aa21.16■□□□□ 0.98
RAB40C-212ENST00000569575 POU3F2P20265 443 aaPredicted RBP21.16■□□□□ 0.98
RAB40C-212ENST00000569575 PTGER4P35408 488 aa21.16■□□□□ 0.98
RAB40C-212ENST00000569575 RPS3AP61247 264 aaKnown RBP21.16■□□□□ 0.98
RAB40C-212ENST00000569575 CRYZQ08257 329 aaKnown RBP21.16■□□□□ 0.98
RAB40C-212ENST00000569575 SYT14P1Q58G82 188 aa21.16■□□□□ 0.98
RAB40C-212ENST00000569575 ST6GALNAC3Q8NDV1 305 aa21.16■□□□□ 0.98
RAB40C-212ENST00000569575 SLCO4A1Q96BD0 722 aa21.16■□□□□ 0.98
RAB40C-212ENST00000569575 ZNF524Q96C55 264 aa21.16■□□□□ 0.98
RAB40C-212ENST00000569575 TIMP4Q99727 224 aa21.16■□□□□ 0.98
RAB40C-212ENST00000569575 PRR14Q9BWN1 585 aa21.16■□□□□ 0.98
RAB40C-212ENST00000569575 REEP1Q9H902 201 aa21.16■□□□□ 0.98
RAB40C-212ENST00000569575 KRCC1Q9NPI7 259 aaPredicted RBP21.16■□□□□ 0.98
RAB40C-212ENST00000569575 TIGARQ9NQ88 270 aa21.16■□□□□ 0.98
RAB40C-212ENST00000569575 KMT2BQ9UMN6 2715 aaPredicted RBP21.16■□□□□ 0.98
RAB40C-212ENST00000569575 ZNF407Q9C0G0 2248 aa21.16■□□□□ 0.98
RAB40C-212ENST00000569575 B8ZZF3 427 aa21.15■□□□□ 0.98
RAB40C-212ENST00000569575 GADD45GO95257 159 aa21.15■□□□□ 0.98
RAB40C-212ENST00000569575 LYPD3O95274 346 aa21.15■□□□□ 0.98
RAB40C-212ENST00000569575 FASP25445 335 aa21.15■□□□□ 0.98
RAB40C-212ENST00000569575 LHX2P50458 406 aa21.15■□□□□ 0.98
RAB40C-212ENST00000569575 MFSD13AQ14CX5 517 aa21.15■□□□□ 0.98
RAB40C-212ENST00000569575 WLSQ5T9L3 541 aa21.15■□□□□ 0.98
RAB40C-212ENST00000569575 RRM2BQ7LG56 351 aa21.15■□□□□ 0.98
RAB40C-212ENST00000569575 ACOT11Q8WXI4 607 aaPredicted RBP21.15■□□□□ 0.98
RAB40C-212ENST00000569575 KLHL15Q96M94 604 aa21.15■□□□□ 0.98
RAB40C-212ENST00000569575 BDH2Q9BUT1 245 aa21.15■□□□□ 0.98
RAB40C-212ENST00000569575 PRDM14Q9GZV8 571 aa21.15■□□□□ 0.98
RAB40C-212ENST00000569575 SLC6A5Q9Y345 797 aa21.15■□□□□ 0.98
RAB40C-212ENST00000569575 AHRRA9YTQ3 701 aa21.14■□□□□ 0.97
RAB40C-212ENST00000569575 H3BML4 177 aa21.14■□□□□ 0.97
RAB40C-212ENST00000569575 GNGT2O14610 69 aa21.14■□□□□ 0.97
RAB40C-212ENST00000569575 EFNA2O43921 213 aa21.14■□□□□ 0.97
RAB40C-212ENST00000569575 NPIPB7O75200 414 aa21.14■□□□□ 0.97
RAB40C-212ENST00000569575 PTGS2P35354 604 aa21.14■□□□□ 0.97
RAB40C-212ENST00000569575 YAP1P46937 504 aaKnown RBP21.14■□□□□ 0.97
RAB40C-212ENST00000569575 ARHGDIAP52565 204 aa21.14■□□□□ 0.97
RAB40C-212ENST00000569575 PRSS27Q9BQR3 290 aa21.14■□□□□ 0.97
RAB40C-212ENST00000569575 TMCC3Q9ULS5 477 aa21.14■□□□□ 0.97
RAB40C-212ENST00000569575 MED31Q9Y3C7 131 aa21.14■□□□□ 0.97
RAB40C-212ENST00000569575 LIPGQ9Y5X9 500 aa21.14■□□□□ 0.97
RAB40C-212ENST00000569575 A0A1B0GTH9 108 aa21.13■□□□□ 0.97
RAB40C-212ENST00000569575 EIF4E1BA6NMX2 242 aaKnown RBP21.13■□□□□ 0.97
RAB40C-212ENST00000569575 J3KTA2 159 aa21.13■□□□□ 0.97
RAB40C-212ENST00000569575 CLOCKO15516 846 aa21.13■□□□□ 0.97
RAB40C-212ENST00000569575 THY1P04216 161 aa21.13■□□□□ 0.97
RAB40C-212ENST00000569575 GABRA1P14867 456 aa21.13■□□□□ 0.97
RAB40C-212ENST00000569575 RRM2P31350 389 aa21.13■□□□□ 0.97
RAB40C-212ENST00000569575 IFNGR2P38484 337 aa21.13■□□□□ 0.97
RAB40C-212ENST00000569575 CLDN18P56856 261 aa21.13■□□□□ 0.97
RAB40C-212ENST00000569575 CSNK2A1P68400 391 aaPredicted RBP21.13■□□□□ 0.97
RAB40C-212ENST00000569575 SPIBQ01892 262 aa21.13■□□□□ 0.97
RAB40C-212ENST00000569575 DCST1Q5T197 706 aa21.13■□□□□ 0.97
RAB40C-212ENST00000569575 GFRALQ6UXV0 394 aa21.13■□□□□ 0.97
RAB40C-212ENST00000569575 TSPYL5Q86VY4 417 aaPredicted RBP21.13■□□□□ 0.97
RAB40C-212ENST00000569575 RNF217Q8TC41 542 aa21.13■□□□□ 0.97
RAB40C-212ENST00000569575 ZPLD1Q8TCW7 415 aa21.13■□□□□ 0.97
RAB40C-212ENST00000569575 TMEM239Q8WW34 195 aa21.13■□□□□ 0.97
RAB40C-212ENST00000569575 NRBF2Q96F24 287 aa21.13■□□□□ 0.97
RAB40C-212ENST00000569575 TSPAN10Q9H1Z9 355 aaPredicted RBP21.13■□□□□ 0.97
RAB40C-212ENST00000569575 S100A14Q9HCY8 104 aa21.13■□□□□ 0.97
RAB40C-212ENST00000569575 TRAV36DV7A0A075B6V5 113 aa21.12■□□□□ 0.97
RAB40C-212ENST00000569575 TMEM72A0PK05 275 aa21.12■□□□□ 0.97
RAB40C-212ENST00000569575 ENTPD5O75356 428 aa21.12■□□□□ 0.97
RAB40C-212ENST00000569575 AHSA1O95433 338 aa21.12■□□□□ 0.97
RAB40C-212ENST00000569575 PMS2P2O95744 297 aa21.12■□□□□ 0.97
RAB40C-212ENST00000569575 MT-ATP6P00846 226 aa21.12■□□□□ 0.97
RAB40C-212ENST00000569575 LDLRP01130 860 aa21.12■□□□□ 0.97
RAB40C-212ENST00000569575 ATP6AP1Q15904 470 aa21.12■□□□□ 0.97
RAB40C-212ENST00000569575 TMEM176BQ3YBM2 270 aaPredicted RBP21.12■□□□□ 0.97
RAB40C-212ENST00000569575 FAM69AQ5T7M9 428 aa21.12■□□□□ 0.97
RAB40C-212ENST00000569575 TMPPEQ6ZT21 453 aa21.12■□□□□ 0.97
RAB40C-212ENST00000569575 CHMP1BQ7LBR1 199 aa21.12■□□□□ 0.97
RAB40C-212ENST00000569575 CDK20Q8IZL9 346 aa21.12■□□□□ 0.97
RAB40C-212ENST00000569575 OR5M1Q8NGP8 315 aa21.12■□□□□ 0.97
RAB40C-212ENST00000569575 MFSD8Q8NHS3 518 aa21.12■□□□□ 0.97
RAB40C-212ENST00000569575 WDYHV1Q96HA8 205 aa21.12■□□□□ 0.97
RAB40C-212ENST00000569575 NPAS1Q99742 590 aa21.12■□□□□ 0.97
RAB40C-212ENST00000569575 MAN2C1Q9NTJ4 1040 aa21.12■□□□□ 0.97
RAB40C-212ENST00000569575 SPRR3Q9UBC9 169 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms