RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 ATRAIDQ6UW56 229 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 FAM83HQ6ZRV2 1179 aaPredicted RBP10.13□□□□□ -0.79
PALB2-206ENST00000568219 HIST3H2AQ7L7L0 130 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 SLC16A13Q7RTY0 426 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 SLC16A11Q8NCK7 471 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 HAVCR2Q8TDQ0 301 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 HIST1H2ACQ93077 130 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 S100PBPQ96BU1 408 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 ZNF578Q96N58 590 aaPredicted RBP10.13□□□□□ -0.79
PALB2-206ENST00000568219 SLC6A17Q9H1V8 727 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 A4GALTQ9NPC4 353 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 GPR55Q9Y2T6 319 aaPredicted RBP10.13□□□□□ -0.79
PALB2-206ENST00000568219 MCRIP1C9JLW8 97 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 PYCARD-AS1I3L0S3 204 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 M0QYG6 137 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 CDC123O75794 336 aaPredicted RBP10.13□□□□□ -0.79
PALB2-206ENST00000568219 PRH1P02810 166 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 ATP5A1P25705 553 aaKnown RBP10.13□□□□□ -0.79
PALB2-206ENST00000568219 PTBP1P26599 531 aaKnown RBP eCLIP10.13□□□□□ -0.79
PALB2-206ENST00000568219 CD34P28906 385 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 PDZK1IP1Q13113 114 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 RAB11FIP2Q7L804 512 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 GDF7Q7Z4P5 450 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 RTN4RL1Q86UN2 441 aaPredicted RBP10.13□□□□□ -0.79
PALB2-206ENST00000568219 CBLN2Q8IUK8 224 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 SOCS4Q8WXH5 440 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 METTL8Q9H825 291 aaKnown RBP10.13□□□□□ -0.79
PALB2-206ENST00000568219 ELL3Q9HB65 397 aaPredicted RBP10.13□□□□□ -0.79
PALB2-206ENST00000568219 ZMAT5Q9UDW3 170 aaKnown RBP10.13□□□□□ -0.79
PALB2-206ENST00000568219 IL36AQ9UHA7 158 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 KIF25Q9UIL4 384 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 TRIP12Q14669 1992 aaPredicted RBP10.13□□□□□ -0.79
PALB2-206ENST00000568219 DCDC2BA2VCK2 349 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 OR5K3A6NET4 321 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 A8MVJ9 347 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 C1orf196B1AJZ1 125 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 RAB3DO95716 219 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 CXCL2P19875 107 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 SLC6A6P31641 620 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 CCKBRP32239 447 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 PRSS3P35030 304 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 SIRPAP78324 504 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 FOXK2Q01167 660 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 ZNF227Q86WZ6 799 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 DCUN1D3Q8IWE4 304 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 OR4E2Q8NGC2 313 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 CNN2Q99439 309 aaKnown RBP10.13□□□□□ -0.79
PALB2-206ENST00000568219 NPAS1Q99742 590 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 CMSS1Q9BQ75 279 aaKnown RBP10.13□□□□□ -0.79
PALB2-206ENST00000568219 RPS10P5Q9NQ39 176 aa10.13□□□□□ -0.79
PALB2-206ENST00000568219 TRBV5-4A0A0C4DH59 114 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 SURF4O15260 269 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 SLCO2B1O94956 709 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 OR8G3PP0DMU2 310 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 EPXP11678 715 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 IFNGR1P15260 489 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 GABRA3P34903 492 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 RPS27P42677 84 aaKnown RBP10.12□□□□□ -0.79
PALB2-206ENST00000568219 PCBP3P57721 371 aaKnown RBP10.12□□□□□ -0.79
PALB2-206ENST00000568219 CDK5Q00535 292 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 AGERQ15109 404 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 OR7A5Q15622 319 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 TMEM201Q5SNT2 666 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 KIAA1211LQ6NV74 962 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 AMER3Q8N944 861 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 AMDHD1Q96NU7 426 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 CMKLR1Q99788 373 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 VRK1Q99986 396 aaPredicted RBP10.12□□□□□ -0.79
PALB2-206ENST00000568219 CCDC86Q9H6F5 360 aaKnown RBP10.12□□□□□ -0.79
PALB2-206ENST00000568219 SLC22A11Q9NSA0 550 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 CKLFQ9UBR5 152 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 TESQ9UGI8 421 aaKnown RBP10.12□□□□□ -0.79
PALB2-206ENST00000568219 A0A0B4J2A0 478 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 LEFTY2O00292 366 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 FOXE1O00358 373 aaPredicted RBP10.12□□□□□ -0.79
PALB2-206ENST00000568219 KHNYNO15037 678 aaKnown RBP10.12□□□□□ -0.79
PALB2-206ENST00000568219 SBK2P0C263 348 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 SRMP19623 302 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 PRPH2P23942 346 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 PBX2P40425 430 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 RBM34P42696 430 aaKnown RBP10.12□□□□□ -0.79
PALB2-206ENST00000568219 CBX5P45973 191 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 LSSP48449 732 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 SGCGQ13326 291 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 LRRTM1Q86UE6 522 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 SUSD6Q92537 303 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 ULBP3Q9BZM4 244 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 PARP12Q9H0J9 701 aaKnown RBP10.12□□□□□ -0.79
PALB2-206ENST00000568219 SYT4Q9H2B2 425 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 SHPKQ9UHJ6 478 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 TRAPPC13A5PLN9 417 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 AIPO00170 330 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 F12P00748 615 aaPredicted RBP10.12□□□□□ -0.79
PALB2-206ENST00000568219 TACSTD2P09758 323 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 MAKP20794 623 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 TBXA2RP21731 343 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 PDX1P52945 283 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 NRG3P56975 720 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 CBFBQ13951 182 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 ZNHIT3Q15649 155 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms