RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 VRK2Q86Y07 508 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 ZZZ3Q8IYH5 903 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 GABRG1Q8N1C3 465 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 LSMEM1Q8N8F7 131 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 BBS10Q8TAM1 723 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 LINC01560Q8TB33 94 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 ROBO4Q8WZ75 1007 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 NINJ1Q92982 152 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 ANKRD27Q96NW4 1050 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 WFIKKN1Q96NZ8 548 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 PSD2Q9BQI7 771 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 POTEKPQ9BYX7 375 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 OPN3Q9H1Y3 402 aaPredicted RBP7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 PIF1Q9H611 641 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 TMEM185BQ9H7F4 350 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 EVA1AQ9H8M9 152 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 PLEKHF2Q9H8W4 249 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 C12orf10Q9HB07 376 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 NPHS2Q9NP85 383 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 CTPS2Q9NRF8 586 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 RLIMQ9NVW2 624 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 DCTN4Q9UJW0 460 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 OSGIN1Q9UJX0 560 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 PROCRQ9UNN8 238 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 ZNF232Q9UNY5 417 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 CORO2BQ9UQ03 480 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 ZNF443Q9Y2A4 671 aaPredicted RBP7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 NDUFAF1Q9Y375 327 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 EMC9Q9Y3B6 208 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 SPIN1Q9Y657 262 aaPredicted RBP7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 ROS1P08922 2347 aa7.29□□□□□ -1.24
HDGFL3-205ENST00000568129 CCDC168Q8NDH2 2452 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 ARID1AO14497 2285 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 TMED7-TICAM2A0A0A6YYA0 188 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 A0A0G2JND7 137 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 TMEM72A0PK05 275 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 SH3D21A4FU49 640 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 ZNF716A6NP11 495 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 NR5A2O00482 541 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 FBP2O00757 339 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 SLC22A2O15244 555 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 GCM2O75603 506 aaPredicted RBP7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 CYP7B1O75881 506 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 HRGP04196 525 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 POU2F1P14859 743 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 PPP3CBP16298 524 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 NCF2P19878 526 aaPredicted RBP7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 CRYGSP22914 178 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 PRKAR1BP31321 381 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 MDH1P40925 334 aaKnown RBP7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 OR3A2P47893 321 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 CCR4P51679 360 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 CTBP2P56545 445 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 CDK6Q00534 326 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 RBBP4Q09028 425 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 MYBPHQ13203 477 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 LARS2Q15031 903 aaKnown RBP7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 WBP2NLQ6ICG8 309 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 C6orf89Q6UWU4 347 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 TFAP2EQ6VUC0 442 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 SPNS3Q6ZMD2 512 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 C22orf34Q6ZV56 151 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 NUFIP2Q7Z417 695 aaKnown RBP7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 SERPINA11Q86U17 422 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 PTOV1Q86YD1 416 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 LURAP1LQ8IV03 231 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 TUSC5Q8IXB3 177 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 TMCO5AQ8N6Q1 288 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 CNEP1R1Q8N9A8 125 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 BHLHE22Q8NFJ8 381 aaPredicted RBP7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 ABHD3Q8WU67 409 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 MAL2Q969L2 176 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 ARL5BQ96KC2 179 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 CGREF1Q99674 301 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 TMEM120AQ9BXJ8 343 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 HDHD5Q9BXW7 423 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 PRRG4Q9BZD6 226 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 CXXC4Q9H2H0 198 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 ARMC7Q9H6L4 198 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 KAT8Q9H7Z6 458 aaKnown RBP7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 SAR1AQ9NR31 198 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 FGFR1OP2Q9NVK5 253 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 TMEM181Q9P2C4 612 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 KLHL14Q9P2G3 628 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 KLHL9Q9P2J3 617 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 NDRG3Q9UGV2 375 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 GPR52Q9Y2T5 361 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 TMED7Q9Y3B3 224 aa7.28□□□□□ -1.24
HDGFL3-205ENST00000568129 A0A1W2PPR1 153 aa7.27□□□□□ -1.25
HDGFL3-205ENST00000568129 TMEM247A6NEH6 219 aa7.27□□□□□ -1.25
HDGFL3-205ENST00000568129 ENO4A6NNW6 628 aa7.27□□□□□ -1.25
HDGFL3-205ENST00000568129 DEFB108AA8MXU0 73 aa7.27□□□□□ -1.25
HDGFL3-205ENST00000568129 EVPLLA8MZ36 301 aa7.27□□□□□ -1.25
HDGFL3-205ENST00000568129 TMEM229AB2RXF0 380 aa7.27□□□□□ -1.25
HDGFL3-205ENST00000568129 ZNF814B7Z6K7 855 aa7.27□□□□□ -1.25
HDGFL3-205ENST00000568129 SULT2B1O00204 365 aa7.27□□□□□ -1.25
HDGFL3-205ENST00000568129 SIAH2O43255 324 aa7.27□□□□□ -1.25
HDGFL3-205ENST00000568129 EIF1BO60739 113 aaKnown RBP7.27□□□□□ -1.25
HDGFL3-205ENST00000568129 SMNDC1O75940 238 aaKnown RBP eCLIP7.27□□□□□ -1.25
HDGFL3-205ENST00000568129 MFN2O95140 757 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms