RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 PRDX1Q06830 199 aaKnown RBP4.88□□□□□ -1.63
CAPN3-217ENST00000567817 ST3GAL4Q11206 333 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 TSTA3Q13630 321 aaPredicted RBP4.88□□□□□ -1.63
CAPN3-217ENST00000567817 NFE2L1Q14494 772 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 ZNF234Q14588 700 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 MPEG1Q2M385 716 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 ANKDD1AQ495B1 522 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 KLHL22Q53GT1 634 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 ARMCX4Q5H9R4 360 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 TPRG1LQ5T0D9 272 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 C12orf73Q69YU5 71 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 C6orf120Q7Z4R8 191 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 HEATR4Q86WZ0 1026 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 CYP4Z2PQ8N1L4 340 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 RNF175Q8N4F7 328 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 OR10Q1Q8NGQ4 319 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 OR2L8Q8NGY9 312 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 APOBEC4Q8WW27 367 aaKnown RBP4.88□□□□□ -1.63
CAPN3-217ENST00000567817 ASB12Q8WXK4 309 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 SORCS1Q8WY21 1168 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 SGCDQ92629 289 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 CIDECQ96AQ7 238 aaPredicted RBP4.88□□□□□ -1.63
CAPN3-217ENST00000567817 EFHD2Q96C19 240 aaPredicted RBP4.88□□□□□ -1.63
CAPN3-217ENST00000567817 TMCO6Q96DC7 493 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 OTUB1Q96FW1 271 aaPredicted RBP4.88□□□□□ -1.63
CAPN3-217ENST00000567817 TMEM19Q96HH6 336 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 SLC35G5Q96KT7 338 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 CEP19Q96LK0 163 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 PRRC1Q96M27 445 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 LRRC3BQ96PB8 259 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 SLC38A2Q96QD8 506 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 MGLLQ99685 303 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 TREX2Q9BQ50 279 aaPredicted RBP4.88□□□□□ -1.63
CAPN3-217ENST00000567817 FNDC11Q9BVV2 318 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 PINK1Q9BXM7 581 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 ZNF717Q9BY31 904 aaPredicted RBP4.88□□□□□ -1.63
CAPN3-217ENST00000567817 POLDIP3Q9BY77 421 aaKnown RBP4.88□□□□□ -1.63
CAPN3-217ENST00000567817 KRTAP17-1Q9BYP8 105 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 NUAK2Q9H093 628 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 NMNAT1Q9HAN9 279 aaPredicted RBP4.88□□□□□ -1.63
CAPN3-217ENST00000567817 ISYNA1Q9NPH2 558 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 SLC35C2Q9NQQ7 365 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 PRDM8Q9NQV8 689 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 TMEM184CQ9NVA4 438 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 MED17Q9NVC6 651 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 IRAK4Q9NWZ3 460 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 TRNAU1APQ9NX07 287 aaKnown RBP4.88□□□□□ -1.63
CAPN3-217ENST00000567817 LYARQ9NX58 379 aaKnown RBP4.88□□□□□ -1.63
CAPN3-217ENST00000567817 MS4A12Q9NXJ0 267 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 KLHL28Q9NXS3 571 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 ZNF226Q9NYT6 803 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 SELENONQ9NZV5 590 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 TAAR2Q9P1P5 351 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 ANKMY1Q9P2S6 941 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 THAP10Q9P2Z0 257 aaPredicted RBP4.88□□□□□ -1.63
CAPN3-217ENST00000567817 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.88□□□□□ -1.63
CAPN3-217ENST00000567817 STUB1Q9UNE7 303 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 ENTPD4Q9Y227 616 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 KLHL20Q9Y2M5 609 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 IFT52Q9Y366 437 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 SNX8Q9Y5X2 465 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 DGKBQ9Y6T7 804 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 COLEC10Q9Y6Z7 277 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 MUC22E2RYF6 1773 aaPredicted RBP4.88□□□□□ -1.63
CAPN3-217ENST00000567817 ABCA12Q86UK0 2595 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 GOLGA4Q13439 2230 aaKnown RBP4.88□□□□□ -1.63
CAPN3-217ENST00000567817 AHCTF1Q8WYP5 2266 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 PLXNA2O75051 1894 aa4.88□□□□□ -1.63
CAPN3-217ENST00000567817 ZFC3H1O60293 1989 aaKnown RBP4.87□□□□□ -1.63
CAPN3-217ENST00000567817 ATG2BQ96BY7 2078 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 DOPEY2Q9Y3R5 2298 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 A0A0A6YYD5 115 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 LOC102723971A0A1B0GUV8 181 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 IQCMA0A1B0GVH7 501 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 TMEM129A0AVI4 362 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 LRIT2A6NDA9 550 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 TBC1D3BA6NDS4 549 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 URADA6NGE7 173 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 PRRT4C9JH25 899 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 H7C1Q1 480 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 J3QRK9 145 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 HAT1O14929 419 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 MYL12BO14950 172 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 MAGEB3O15480 346 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 ZSCAN9O15535 394 aaPredicted RBP4.87□□□□□ -1.63
CAPN3-217ENST00000567817 ZW10O43264 779 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 CHST10O43529 356 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 NME6O75414 186 aaPredicted RBP4.87□□□□□ -1.63
CAPN3-217ENST00000567817 LGI1O95970 557 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 VIPP01282 170 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 OPN1SWP03999 348 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 BCHEP06276 602 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 FHP07954 510 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 STSP08842 583 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 HOXC4P09017 264 aaPredicted RBP4.87□□□□□ -1.63
CAPN3-217ENST00000567817 NR2F1P10589 423 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 SFTPCP11686 197 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 MYF5P13349 255 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 MYL12AP19105 171 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 GALP22466 123 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms