RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 ATP6V1C2Q8NEY4 427 aa11.18□□□□□ -0.62
RNF40-208ENST00000565995 FBXO30Q8TB52 745 aa11.18□□□□□ -0.62
RNF40-208ENST00000565995 AGR3Q8TD06 166 aa11.18□□□□□ -0.62
RNF40-208ENST00000565995 ST8SIA1Q92185 356 aa11.18□□□□□ -0.62
RNF40-208ENST00000565995 PPCDCQ96CD2 204 aa11.18□□□□□ -0.62
RNF40-208ENST00000565995 FKRPQ9H9S5 495 aa11.18□□□□□ -0.62
RNF40-208ENST00000565995 EML4Q9HC35 981 aaKnown RBP11.18□□□□□ -0.62
RNF40-208ENST00000565995 ASB6Q9NWX5 421 aa11.18□□□□□ -0.62
RNF40-208ENST00000565995 C1orf109Q9NX04 203 aa11.18□□□□□ -0.62
RNF40-208ENST00000565995 EMC3Q9P0I2 261 aa11.18□□□□□ -0.62
RNF40-208ENST00000565995 DTNAQ9Y4J8 743 aa11.18□□□□□ -0.62
RNF40-208ENST00000565995 CIB4A0PJX0 185 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 GTPBP1O00178 669 aaKnown RBP11.17□□□□□ -0.62
RNF40-208ENST00000565995 GPR171O14626 319 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 NPHS1O60500 1241 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 LYPLA1O75608 230 aaPredicted RBP11.17□□□□□ -0.62
RNF40-208ENST00000565995 LY6HO94772 140 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 ITGA5P08648 1049 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 VIMP08670 466 aaKnown RBP11.17□□□□□ -0.62
RNF40-208ENST00000565995 ZNF23P17027 643 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 SDC1P18827 310 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 SERPINB5P36952 375 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 SLC1A6P48664 564 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 ABCE1P61221 599 aaKnown RBP11.17□□□□□ -0.62
RNF40-208ENST00000565995 PHC1P78364 1004 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 CBFBQ13951 182 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 QPRTQ15274 297 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 TIGD2Q4W5G0 525 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 AP1ARQ63HQ0 302 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 C17orf78Q8N4C9 275 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 C1orf162Q8NEQ5 155 aaPredicted RBP11.17□□□□□ -0.62
RNF40-208ENST00000565995 APH1AQ96BI3 265 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 PIMREGQ9BSJ6 248 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 TRMOQ9BU70 441 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 ACTRT3Q9BYD9 372 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 LAT2Q9GZY6 243 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 CHODLQ9H9P2 273 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 TNFRSF12AQ9NP84 129 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 SH3BP4Q9P0V3 963 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 DCTN4Q9UJW0 460 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 FIS1Q9Y3D6 152 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 TGP01266 2768 aa11.17□□□□□ -0.62
RNF40-208ENST00000565995 MGAM2Q2M2H8 2515 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 IGHV4-61A0A0C4DH41 118 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 M0R1B8 84 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 SULT2B1O00204 365 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 SLC28A1O00337 649 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 KLF11O14901 512 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 DNPH1O43598 174 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 TCF21O43680 179 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 PMS2P2O95744 297 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 TGFAP01135 160 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 CHRNGP07510 517 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 APEHP13798 732 aaKnown RBP11.16□□□□□ -0.62
RNF40-208ENST00000565995 ATP6V1C1P21283 382 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 CFPP27918 469 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 H3F3AP84243 136 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 CHRNEQ04844 493 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 GGTLC2Q14390 218 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 DCST2Q5T1A1 773 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 ZNF540Q8NDQ6 660 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 SLC25A43Q8WUT9 341 aaPredicted RBP11.16□□□□□ -0.62
RNF40-208ENST00000565995 OTUB1Q96FW1 271 aaPredicted RBP11.16□□□□□ -0.62
RNF40-208ENST00000565995 FOXN4Q96NZ1 517 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 SORCS2Q96PQ0 1159 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 OR5B2Q96R09 309 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 PLA2G12AQ9BZM1 189 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 NMUR2Q9GZQ4 415 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 SERINC1Q9NRX5 453 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 ZCCHC3Q9NUD5 404 aaKnown RBP11.16□□□□□ -0.62
RNF40-208ENST00000565995 ACER3Q9NUN7 267 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 THAP1Q9NVV9 213 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 GPATCH2Q9NW75 528 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 ATP6V1HQ9UI12 483 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 AMDHD2Q9Y303 409 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 NOSIPQ9Y314 301 aaKnown RBP11.16□□□□□ -0.62
RNF40-208ENST00000565995 TMED5Q9Y3A6 229 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 FKBP7Q9Y680 259 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 ATP23Q9Y6H3 246 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 KCNE3Q9Y6H6 103 aa11.16□□□□□ -0.62
RNF40-208ENST00000565995 NPIPA5A0A0B4J1W7 369 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 A0A1W2PR80 420 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 CCT8L1PA6NM43 557 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 NPIPA7E9PJI5 369 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 AKAP10O43572 662 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 ITM2AO43736 263 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 KRT16P08779 473 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 NPIPA8P0DM63 369 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 UBL4AP11441 157 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 FKBP2P26885 142 aaKnown RBP11.15□□□□□ -0.62
RNF40-208ENST00000565995 GIFP27352 417 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 ASMTP46597 345 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 CLK1P49759 484 aaKnown RBP11.15□□□□□ -0.62
RNF40-208ENST00000565995 FOXG1P55316 489 aaPredicted RBP11.15□□□□□ -0.62
RNF40-208ENST00000565995 SESN3P58005 492 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 SKP2Q13309 424 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 LASP1Q14847 261 aaKnown RBP11.15□□□□□ -0.62
RNF40-208ENST00000565995 ZNF141Q15928 474 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 ZSWIM7Q19AV6 140 aa11.15□□□□□ -0.62
RNF40-208ENST00000565995 CR1LQ2VPA4 569 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms