RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 ENPP1P22413 925 aa16.41■□□□□ 0.22
CLN6-204ENST00000564752 SESN3P58005 492 aa16.41■□□□□ 0.22
CLN6-204ENST00000564752 RAC3P60763 192 aa16.41■□□□□ 0.22
CLN6-204ENST00000564752 C6orf10Q5SRN2 563 aa16.41■□□□□ 0.22
CLN6-204ENST00000564752 ALKBH2Q6NS38 261 aa16.41■□□□□ 0.22
CLN6-204ENST00000564752 LRRC74BQ6ZQY2 392 aa16.41■□□□□ 0.22
CLN6-204ENST00000564752 LILRB1Q8NHL6 650 aaPredicted RBP16.41■□□□□ 0.22
CLN6-204ENST00000564752 ZNF563Q8TA94 476 aa16.41■□□□□ 0.22
CLN6-204ENST00000564752 HSD17B8Q92506 261 aa16.41■□□□□ 0.22
CLN6-204ENST00000564752 ITCHQ96J02 903 aa16.41■□□□□ 0.22
CLN6-204ENST00000564752 SLC38A1Q9H2H9 487 aa16.41■□□□□ 0.22
CLN6-204ENST00000564752 SERINC1Q9NRX5 453 aa16.41■□□□□ 0.22
CLN6-204ENST00000564752 SLC6A13Q9NSD5 602 aa16.41■□□□□ 0.22
CLN6-204ENST00000564752 ING1Q9UK53 422 aaPredicted RBP16.41■□□□□ 0.22
CLN6-204ENST00000564752 A0A1W2PNR3 127 aa16.4■□□□□ 0.22
CLN6-204ENST00000564752 FAM234BA2RU67 622 aa16.4■□□□□ 0.22
CLN6-204ENST00000564752 ZNF814B7Z6K7 855 aa16.4■□□□□ 0.22
CLN6-204ENST00000564752 BCAS1O75363 584 aaPredicted RBP16.4■□□□□ 0.22
CLN6-204ENST00000564752 TGDSO95455 350 aa16.4■□□□□ 0.22
CLN6-204ENST00000564752 ADAP00813 363 aa16.4■□□□□ 0.22
CLN6-204ENST00000564752 IL32P24001 234 aa16.4■□□□□ 0.22
CLN6-204ENST00000564752 RYKP34925 604 aa16.4■□□□□ 0.22
CLN6-204ENST00000564752 MAGEA8P43361 318 aa16.4■□□□□ 0.22
CLN6-204ENST00000564752 KCNJ10P78508 379 aa16.4■□□□□ 0.22
CLN6-204ENST00000564752 MERTKQ12866 999 aa16.4■□□□□ 0.22
CLN6-204ENST00000564752 P2RY6Q15077 328 aa16.4■□□□□ 0.22
CLN6-204ENST00000564752 TAB1Q15750 504 aa16.4■□□□□ 0.22
CLN6-204ENST00000564752 NCMAPQ5T1S8 102 aa16.4■□□□□ 0.22
CLN6-204ENST00000564752 AP1ARQ63HQ0 302 aa16.4■□□□□ 0.22
CLN6-204ENST00000564752 ARFGAP2Q8N6H7 521 aa16.4■□□□□ 0.22
CLN6-204ENST00000564752 WDR60Q8WVS4 1066 aa16.4■□□□□ 0.22
CLN6-204ENST00000564752 VPS33AQ96AX1 596 aa16.4■□□□□ 0.22
CLN6-204ENST00000564752 ZG16BQ96DA0 208 aa16.4■□□□□ 0.22
CLN6-204ENST00000564752 OR5B2Q96R09 309 aa16.4■□□□□ 0.22
CLN6-204ENST00000564752 VIPAS39Q9H9C1 493 aa16.4■□□□□ 0.22
CLN6-204ENST00000564752 BCO1Q9HAY6 547 aa16.4■□□□□ 0.22
CLN6-204ENST00000564752 EXOSC3Q9NQT5 275 aaKnown RBP16.4■□□□□ 0.22
CLN6-204ENST00000564752 ACER3Q9NUN7 267 aa16.4■□□□□ 0.22
CLN6-204ENST00000564752 INTS9Q9NV88 658 aaKnown RBP16.4■□□□□ 0.22
CLN6-204ENST00000564752 P2RX2Q9UBL9 471 aa16.4■□□□□ 0.22
CLN6-204ENST00000564752 LAMP3Q9UQV4 416 aa16.4■□□□□ 0.22
CLN6-204ENST00000564752 IGHV3-15A0A0B4J1V0 119 aa16.39■□□□□ 0.21
CLN6-204ENST00000564752 AGAP5A6NIR3 686 aa16.39■□□□□ 0.21
CLN6-204ENST00000564752 CLDN24A6NM45 220 aa16.39■□□□□ 0.21
CLN6-204ENST00000564752 ZCCHC18P0CG32 403 aa16.39■□□□□ 0.21
CLN6-204ENST00000564752 H2AFXP16104 143 aaPredicted RBP16.39■□□□□ 0.21
CLN6-204ENST00000564752 CRATP43155 626 aa16.39■□□□□ 0.21
CLN6-204ENST00000564752 ATP5J2P56134 94 aa16.39■□□□□ 0.21
CLN6-204ENST00000564752 ITGADQ13349 1161 aa16.39■□□□□ 0.21
CLN6-204ENST00000564752 GNA13Q14344 377 aa16.39■□□□□ 0.21
CLN6-204ENST00000564752 CAPRIN1Q14444 709 aaKnown RBP16.39■□□□□ 0.21
CLN6-204ENST00000564752 GTDC1Q4AE62 458 aa16.39■□□□□ 0.21
CLN6-204ENST00000564752 PRIMA1Q86XR5 153 aa16.39■□□□□ 0.21
CLN6-204ENST00000564752 CMIPQ8IY22 773 aa16.39■□□□□ 0.21
CLN6-204ENST00000564752 SLC25A43Q8WUT9 341 aaPredicted RBP16.39■□□□□ 0.21
CLN6-204ENST00000564752 KISS1RQ969F8 398 aaPredicted RBP16.39■□□□□ 0.21
CLN6-204ENST00000564752 USB1Q9BQ65 265 aaKnown RBP16.39■□□□□ 0.21
CLN6-204ENST00000564752 PSD2Q9BQI7 771 aa16.39■□□□□ 0.21
CLN6-204ENST00000564752 EBF4Q9BQW3 602 aa16.39■□□□□ 0.21
CLN6-204ENST00000564752 TPT1P8Q9HAU6 139 aa16.39■□□□□ 0.21
CLN6-204ENST00000564752 NGBQ9NPG2 151 aa16.39■□□□□ 0.21
CLN6-204ENST00000564752 KLHL9Q9P2J3 617 aa16.39■□□□□ 0.21
CLN6-204ENST00000564752 RNF115Q9Y4L5 304 aa16.39■□□□□ 0.21
CLN6-204ENST00000564752 SPIN1Q9Y657 262 aaPredicted RBP16.39■□□□□ 0.21
CLN6-204ENST00000564752 CD3EP07766 207 aa16.38■□□□□ 0.21
CLN6-204ENST00000564752 DANCRP0C864 163 aa16.38■□□□□ 0.21
CLN6-204ENST00000564752 ETFAP13804 333 aa16.38■□□□□ 0.21
CLN6-204ENST00000564752 IL7RP16871 459 aa16.38■□□□□ 0.21
CLN6-204ENST00000564752 PCSK6P29122 969 aa16.38■□□□□ 0.21
CLN6-204ENST00000564752 IDH3AP50213 366 aa16.38■□□□□ 0.21
CLN6-204ENST00000564752 MVDP53602 400 aa16.38■□□□□ 0.21
CLN6-204ENST00000564752 AQP5P55064 265 aa16.38■□□□□ 0.21
CLN6-204ENST00000564752 DSTNP60981 165 aa16.38■□□□□ 0.21
CLN6-204ENST00000564752 RPS4XP62701 263 aaKnown RBP16.38■□□□□ 0.21
CLN6-204ENST00000564752 SYT14P1Q58G82 188 aa16.38■□□□□ 0.21
CLN6-204ENST00000564752 Q6ZT83 130 aa16.38■□□□□ 0.21
CLN6-204ENST00000564752 GRINAQ7Z429 371 aa16.38■□□□□ 0.21
CLN6-204ENST00000564752 CNOT9Q92600 299 aaKnown RBP16.38■□□□□ 0.21
CLN6-204ENST00000564752 AURKBQ96GD4 344 aaPredicted RBP16.38■□□□□ 0.21
CLN6-204ENST00000564752 CCDC28BQ9BUN5 200 aa16.38■□□□□ 0.21
CLN6-204ENST00000564752 ESRP2Q9H6T0 727 aaKnown RBP16.38■□□□□ 0.21
CLN6-204ENST00000564752 ANK3Q12955 4377 aaKnown RBP16.38■□□□□ 0.21
CLN6-204ENST00000564752 FBN3Q75N90 2809 aa16.37■□□□□ 0.21
CLN6-204ENST00000564752 OVOL3O00110 214 aa16.37■□□□□ 0.21
CLN6-204ENST00000564752 CLOCKO15516 846 aa16.37■□□□□ 0.21
CLN6-204ENST00000564752 CYTIPO60759 359 aa16.37■□□□□ 0.21
CLN6-204ENST00000564752 BCHEP06276 602 aa16.37■□□□□ 0.21
CLN6-204ENST00000564752 DBIP07108 87 aaKnown RBP16.37■□□□□ 0.21
CLN6-204ENST00000564752 SOD3P08294 240 aa16.37■□□□□ 0.21
CLN6-204ENST00000564752 RPS4Y1P22090 263 aaKnown RBP16.37■□□□□ 0.21
CLN6-204ENST00000564752 APOBEC1P41238 236 aaKnown RBP16.37■□□□□ 0.21
CLN6-204ENST00000564752 OR3A2P47893 321 aa16.37■□□□□ 0.21
CLN6-204ENST00000564752 MRPL19P49406 292 aaKnown RBP16.37■□□□□ 0.21
CLN6-204ENST00000564752 PLAURQ03405 335 aa16.37■□□□□ 0.21
CLN6-204ENST00000564752 RASGEF1BQ0VAM2 473 aa16.37■□□□□ 0.21
CLN6-204ENST00000564752 SLC2A7Q6PXP3 512 aa16.37■□□□□ 0.21
CLN6-204ENST00000564752 SEZ6L2Q6UXD5 910 aa16.37■□□□□ 0.21
CLN6-204ENST00000564752 BHLHA15Q7RTS1 189 aaPredicted RBP16.37■□□□□ 0.21
CLN6-204ENST00000564752 PEX5LQ8IYB4 626 aa16.37■□□□□ 0.21
CLN6-204ENST00000564752 PMM1Q92871 262 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms