RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	CDKN2D	P55273	166 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	DECR1	Q16698	335 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	FBXO16	Q8IX29	292 aa	Predicted RBP	3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	PRSS35	Q8N3Z0	413 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	PLPP5	Q8NEB5	264 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	EXOSC8	Q96B26	276 aa	Known RBP	3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	KIF13B	Q9NQT8	1826 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	TRAF3IP2	O43734	574 aa	Predicted RBP	3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	PTPN6	P29350	595 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	TSPAN31	Q12999	210 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	DHCR24	Q15392	516 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	OR5L2	Q8NGL0	311 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	NFKBID	Q8NI38	313 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	FDXR	P22570	491 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	LILRA4	P59901	499 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	ABCA11P	Q4W5N1	156 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	LAX1	Q8IWV1	398 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	GALNT16	Q8N428	558 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	TP53I13	Q8NBR0	393 aa	Predicted RBP	3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	SLC24A4	Q8NFF2	622 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	ASB11	Q8WXH4	323 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	CABLES2	Q9BTV7	478 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	MFSD11	O43934	449 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	LAMP1	P11279	417 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	SLC5A12	Q1EHB4	618 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	HHIP	Q96QV1	700 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	OR11A1	Q9GZK7	315 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	SLC22A14	Q9Y267	594 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	SMIM35	A0A1B0GVV1	85 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288		K7EPK0	472 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	PGAM2	P15259	253 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	MAK	P20794	623 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	GDNF	P39905	211 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	SLC19A1	P41440	591 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	TREML2	Q5T2D2	321 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	FAM109B	Q6ICB4	259 aa	Predicted RBP	3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	KCTD18	Q6PI47	426 aa	Predicted RBP	3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	FAM71E2	Q8N5Q1	922 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	NSUN3	Q9H649	340 aa	Known RBP	3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	SLC2A6	Q9UGQ3	507 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288		H3BQ06	376 aa	Predicted RBP	3.98	□□□□□ -1.77
MACF1-231	ENST00000564288		H3BRB1	525 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	WAS	P42768	502 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	STXBP1	P61764	594 aa	Known RBP	3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	INPP5J	Q15735	1006 aa	Predicted RBP	3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	HASPIN	Q8TF76	798 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	PCTP	Q9UKL6	214 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	FARS2	O95363	451 aa	Known RBP	3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	SEMG1	P04279	462 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	PIGA	P37287	484 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	HMGCS2	P54868	508 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	RGS8	P57771	180 aa	Predicted RBP	3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	ST3GAL2	Q16842	350 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	MOB1B	Q7L9L4	216 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	COMMD6	Q7Z4G1	85 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	ZNF383	Q8NA42	475 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	OR13C8	Q8NGS7	320 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	SYNPR	Q8TBG9	265 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	SPIN2A	Q99865	258 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	SPIN2B	Q9BPZ2	258 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	MAFK	O60675	156 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	PMEL	P40967	661 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	MEF2A	Q02078	507 aa	Predicted RBP	3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	SLC35G1	Q2M3R5	365 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	SOWAHA	Q2M3V2	549 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	LRFN4	Q6PJG9	635 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	UNQ6126/PRO20091	Q6UXV3	157 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	OR5D14	Q8NGL3	314 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	ZNF700	Q9H0M5	742 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	RASL12	Q9NYN1	266 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	NRXN3	Q9Y4C0	1643 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	SYT5	O00445	386 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	POMC	P01189	267 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	PRF1	P14222	555 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	SUMO1	P63165	101 aa	Known RBP	3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	KCNJ10	P78508	379 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	MS4A13	Q5J8X5	152 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	AMZ2	Q86W34	360 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	SUN3	Q8TAQ9	357 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	ZNF384	Q8TF68	577 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	AK6	Q9Y3D8	172 aa	Known RBP	3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	SERTM1	A2A2V5	107 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	XRCC3	O43542	346 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	ATP5A1	P25705	553 aa	Known RBP	3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	PCGF3	Q3KNV8	242 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	MRM1	Q6IN84	353 aa	Known RBP	3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	STEAP1B	Q6NZ63	245 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	C19orf48	Q6RUI8	117 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	GTF2A1L	Q9UNN4	478 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	UPK1A	O00322	258 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	HTR1A	P08908	422 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	H2AFB1	P0C5Y9	115 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	LAMTOR1	Q6IAA8	161 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	ST8SIA2	Q92186	375 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	ALS2	Q96Q42	1657 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	MTMR11	A4FU01	709 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	FAM74A7	A6NL05	159 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	PIP5K1C	O60331	668 aa		3.98	□□□□□ -1.77
MACF1-231	ENST00000564288	USP2	O75604	605 aa	Predicted RBP	3.98	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms