RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 OR2B2Q9GZK3 357 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 NDEL1Q9GZM8 345 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 ADAM19Q9H013 955 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 PAPOLBQ9NRJ5 636 aaKnown RBP11.63□□□□□ -0.55
CLK3-214ENST00000564096 QPCTLQ9NXS2 382 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 OSGIN1Q9UJX0 560 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 TMED7Q9Y3B3 224 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 APC2O95996 2303 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 GJE1A6NN92 205 aa11.62□□□□□ -0.55
CLK3-214ENST00000564096 A8MVM7 634 aa11.62□□□□□ -0.55
CLK3-214ENST00000564096 LINC01387J3KSC0 135 aa11.62□□□□□ -0.55
CLK3-214ENST00000564096 ZNF208O43345 1280 aa11.62□□□□□ -0.55
CLK3-214ENST00000564096 LYPD3O95274 346 aa11.62□□□□□ -0.55
CLK3-214ENST00000564096 AHSA1O95433 338 aa11.62□□□□□ -0.55
CLK3-214ENST00000564096 NTN1O95631 604 aa11.62□□□□□ -0.55
CLK3-214ENST00000564096 IFI30P13284 250 aa11.62□□□□□ -0.55
CLK3-214ENST00000564096 CBLP22681 906 aa11.62□□□□□ -0.55
CLK3-214ENST00000564096 IL1RL1Q01638 556 aa11.62□□□□□ -0.55
CLK3-214ENST00000564096 CRYZQ08257 329 aaKnown RBP11.62□□□□□ -0.55
CLK3-214ENST00000564096 KCNAB2Q13303 367 aa11.62□□□□□ -0.55
CLK3-214ENST00000564096 INPP5JQ15735 1006 aaPredicted RBP11.62□□□□□ -0.55
CLK3-214ENST00000564096 WLSQ5T9L3 541 aa11.62□□□□□ -0.55
CLK3-214ENST00000564096 WDR88Q6ZMY6 472 aa11.62□□□□□ -0.55
CLK3-214ENST00000564096 KDF1Q8NAX2 398 aaPredicted RBP11.62□□□□□ -0.55
CLK3-214ENST00000564096 ZFP62Q8NB50 900 aaPredicted RBP11.62□□□□□ -0.55
CLK3-214ENST00000564096 GNPDA2Q8TDQ7 276 aa11.62□□□□□ -0.55
CLK3-214ENST00000564096 STK35Q8TDR2 534 aa11.62□□□□□ -0.55
CLK3-214ENST00000564096 SGTBQ96EQ0 304 aa11.62□□□□□ -0.55
CLK3-214ENST00000564096 SFXN2Q96NB2 322 aa11.62□□□□□ -0.55
CLK3-214ENST00000564096 HES7Q9BYE0 225 aa11.62□□□□□ -0.55
CLK3-214ENST00000564096 Q9H521 79 aa11.62□□□□□ -0.55
CLK3-214ENST00000564096 TUBD1Q9UJT1 453 aa11.62□□□□□ -0.55
CLK3-214ENST00000564096 MRPS18CQ9Y3D5 142 aaKnown RBP11.62□□□□□ -0.55
CLK3-214ENST00000564096 HRH3Q9Y5N1 445 aa11.62□□□□□ -0.55
CLK3-214ENST00000564096 MAGED1Q9Y5V3 778 aaPredicted RBP11.62□□□□□ -0.55
CLK3-214ENST00000564096 CEP295Q9C0D2 2601 aa11.62□□□□□ -0.55
CLK3-214ENST00000564096 TRAV36DV7A0A075B6V5 113 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 ENO4A6NNW6 628 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 PIP5K1CO60331 668 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 TRAPPC6AO75865 159 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 SAGP10523 405 aaPredicted RBP11.61□□□□□ -0.55
CLK3-214ENST00000564096 ZNF24P17028 368 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 ZNF26P17031 533 aaPredicted RBP11.61□□□□□ -0.55
CLK3-214ENST00000564096 GTF2E2P29084 291 aaKnown RBP11.61□□□□□ -0.55
CLK3-214ENST00000564096 AQP4P55087 323 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 CTBP2P56545 445 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 NUP107P57740 925 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 PRKCDQ05655 676 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 FOXO1Q12778 655 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 COX10Q12887 443 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 TSPAN31Q12999 210 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 HYAL4Q2M3T9 481 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 KDM4DQ6B0I6 523 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 ZNF770Q6IQ21 691 aaPredicted RBP11.61□□□□□ -0.55
CLK3-214ENST00000564096 RPL13AP3Q6NVV1 102 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 C1orf94Q6P1W5 598 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 TBPL2Q6SJ96 375 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 LINC00114Q6XXX2 140 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 PARP8Q8N3A8 854 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 FAM109AQ8N4B1 249 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 C10orf53Q8N6V4 93 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 PFN4Q8NHR9 129 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 C9orf43Q8TAL5 461 aaPredicted RBP11.61□□□□□ -0.55
CLK3-214ENST00000564096 EXTL1Q92935 676 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 GTPBP3Q969Y2 492 aaKnown RBP11.61□□□□□ -0.55
CLK3-214ENST00000564096 BPIFA2Q96DR5 249 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 FAM46AQ96IP4 442 aaKnown RBP11.61□□□□□ -0.55
CLK3-214ENST00000564096 BARD1Q99728 777 aaKnown RBP11.61□□□□□ -0.55
CLK3-214ENST00000564096 UCK2Q9BZX2 261 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 ADNPQ9H2P0 1102 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 UBQLN3Q9H347 655 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 SMURF2Q9HAU4 748 aa11.61□□□□□ -0.55
CLK3-214ENST00000564096 RPH3AQ9Y2J0 694 aaPredicted RBP11.61□□□□□ -0.55
CLK3-214ENST00000564096 TMEM72A0PK05 275 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 PINLYPA6NC86 204 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 FAM166BA8MTA8 275 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 EFCAB9A8MZ26 197 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 B4DXG7 233 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 TAF4O00268 1085 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 TFECO14948 347 aaPredicted RBP11.6□□□□□ -0.55
CLK3-214ENST00000564096 OR2T1O43869 369 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 GLSO94925 669 aaPredicted RBP11.6□□□□□ -0.55
CLK3-214ENST00000564096 MT-ATP6P00846 226 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 HPNP05981 417 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 CCNA2P20248 432 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 PTNP21246 168 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 PRKACGP22612 351 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 TCEA1P23193 301 aaKnown RBP11.6□□□□□ -0.55
CLK3-214ENST00000564096 GPR4P46093 362 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 OMPP47874 163 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 SLC9A3P48764 834 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 CLK1P49759 484 aaKnown RBP11.6□□□□□ -0.55
CLK3-214ENST00000564096 DAPP51397 102 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 PPIAP62937 165 aaKnown RBP11.6□□□□□ -0.55
CLK3-214ENST00000564096 MFSD13AQ14CX5 517 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 SYT14P1Q58G82 188 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 CD300LDQ6UXZ3 194 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.6□□□□□ -0.55
CLK3-214ENST00000564096 FAM83FQ8NEG4 500 aaPredicted RBP11.6□□□□□ -0.55
CLK3-214ENST00000564096 ZNF555Q8NEP9 628 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms