RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 HIKESHIQ53FT3 197 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 SYT14P1Q58G82 188 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 DCST2Q5T1A1 773 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 LRIG3Q6UXM1 1119 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 LINGO2Q7L985 606 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 MTDHQ86UE4 582 aaKnown RBP8.99□□□□□ -0.97
SF3B3-204ENST00000563739 MREGQ8N565 214 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 LINC01356Q8N9X3 169 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 FAM71CQ8NEG0 241 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 C1orf162Q8NEQ5 155 aaPredicted RBP8.99□□□□□ -0.97
SF3B3-204ENST00000563739 OR5W2Q8NH69 310 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 CLHC1Q8NHS4 586 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 FAM76AQ8TAV0 307 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 HPS1Q92902 700 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 APH1AQ96BI3 265 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 STACQ99469 402 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 RACGAP1Q9H0H5 632 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 PIGUQ9H490 435 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 METTL17Q9H7H0 456 aaPredicted RBP8.99□□□□□ -0.97
SF3B3-204ENST00000563739 PPCSQ9HAB8 311 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 MYOZ1Q9NP98 299 aaPredicted RBP8.99□□□□□ -0.97
SF3B3-204ENST00000563739 ASB6Q9NWX5 421 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 DCTN4Q9UJW0 460 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 NOSIPQ9Y314 301 aaKnown RBP8.99□□□□□ -0.97
SF3B3-204ENST00000563739 SPEF1Q9Y4P9 236 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 FLVCR1Q9Y5Y0 555 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 PMF1-BGLAPU3KQ54 211 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 ZNF503-AS2A6NEH8 195 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 SERINC4A6NH21 518 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 CCT8L1PA6NM43 557 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 RSL1D1O76021 490 aaKnown RBP8.98□□□□□ -0.97
SF3B3-204ENST00000563739 ALOX5P09917 674 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 SRP14P37108 136 aaKnown RBP8.98□□□□□ -0.97
SF3B3-204ENST00000563739 ATP12AP54707 1039 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 SESN3P58005 492 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 CCNIQ14094 377 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 CASP8Q14790 479 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 MAPK14Q16539 360 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 IQCCQ4KMZ1 466 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 AWAT1Q58HT5 328 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 SPDYAQ5MJ70 313 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 CNPY4Q8N129 248 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 C17orf78Q8N4C9 275 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 ZIC4Q8N9L1 334 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 CEP70Q8NHQ1 597 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 EPS8L3Q8TE67 593 aaKnown RBP8.98□□□□□ -0.97
SF3B3-204ENST00000563739 MZB1Q8WU39 189 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 FAM216AQ8WUB2 273 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 CCDC106Q9BWC9 280 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 OR11A1Q9GZK7 315 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 TUBB1Q9H4B7 451 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 VIPAS39Q9H9C1 493 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 FKRPQ9H9S5 495 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 HHATLQ9HCP6 504 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 CA10Q9NS85 328 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 ACSS1Q9NUB1 689 aaPredicted RBP8.98□□□□□ -0.97
SF3B3-204ENST00000563739 CRNNQ9UBG3 495 aaPredicted RBP8.98□□□□□ -0.97
SF3B3-204ENST00000563739 WBP11Q9Y2W2 641 aaKnown RBP8.98□□□□□ -0.97
SF3B3-204ENST00000563739 AMDHD2Q9Y303 409 aa8.98□□□□□ -0.97
SF3B3-204ENST00000563739 ARHGAP32A7KAX9 2087 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 SMIM23A6NLE4 172 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 G3V2L1 256 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 AKAP10O43572 662 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 PDE5AO76074 875 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 NUDT14O95848 222 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 IGLV1-44P01699 117 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 CELA3BP08861 270 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 UBL4AP11441 157 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 IMPDH2P12268 514 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 DAOP14920 347 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 ATP5F1P24539 256 aaPredicted RBP8.97□□□□□ -0.97
SF3B3-204ENST00000563739 SERPINB4P48594 390 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 IDH3GP51553 393 aaPredicted RBP8.97□□□□□ -0.97
SF3B3-204ENST00000563739 CHN2P52757 468 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 ACTG1P63261 375 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 DEFA6Q01524 100 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 FUT5Q11128 374 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 MLC1Q15049 377 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 PDZK1Q5T2W1 519 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 ZCCHC12Q6PEW1 402 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 TIFABQ6ZNK6 161 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 SZRD1Q7Z422 152 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 PEG10Q86TG7 708 aaKnown RBP8.97□□□□□ -0.97
SF3B3-204ENST00000563739 UBE2J2Q8N2K1 259 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 ZNF786Q8N393 782 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 ZDHHC22Q8N966 263 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 CLDND2Q8NHS1 167 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 RFWD2Q8NHY2 731 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 PSMA8Q8TAA3 256 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 TSSK3Q96PN8 268 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 DOK1Q99704 481 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 CCT7Q99832 543 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 VRK1Q99986 396 aaPredicted RBP8.97□□□□□ -0.97
SF3B3-204ENST00000563739 THUMPD3Q9BV44 507 aaKnown RBP8.97□□□□□ -0.97
SF3B3-204ENST00000563739 REEP4Q9H6H4 257 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 ZNF696Q9H7X3 374 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 MID1IP1Q9NPA3 183 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 CTPS2Q9NRF8 586 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 ZCCHC3Q9NUD5 404 aaKnown RBP8.97□□□□□ -0.97
SF3B3-204ENST00000563739 ACER3Q9NUN7 267 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms