RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 ARHGAP22Q7Z5H3 698 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 TAF8Q7Z7C8 310 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 SYVN1Q86TM6 617 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 OR11H4Q8NGC9 324 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 OR4C6Q8NH72 309 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 DTX3LQ8TDB6 740 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 SETD7Q8WTS6 366 aaKnown RBP4.17□□□□□ -1.74
LINC00254-201ENST00000563416 ANP32BQ92688 251 aaKnown RBP4.17□□□□□ -1.74
LINC00254-201ENST00000563416 SLCO4A1Q96BD0 722 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 PDXPQ96GD0 296 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 PPP1R2P1Q96PQ5 205 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 RASL10BQ96S79 203 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 C19orf43Q9BQ61 176 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 LRRC61Q9BV99 259 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 TRIM15Q9C019 465 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 ATG10Q9H0Y0 220 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 TCEAL2Q9H3H9 227 aaPredicted RBP4.17□□□□□ -1.74
LINC00254-201ENST00000563416 TRABDQ9H4I3 376 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 C10orf88Q9H8K7 445 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 GSN-AS1Q9NRJ2 163 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 PHPT1Q9NRX4 125 aaPredicted RBP4.17□□□□□ -1.74
LINC00254-201ENST00000563416 NLGN3Q9NZ94 848 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 PKD2L2Q9NZM6 624 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 OR6C2Q9NZP2 312 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 HACD3Q9P035 362 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 EPHA6Q9UF33 1036 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 APOBEC3BQ9UH17 382 aaKnown RBP4.17□□□□□ -1.74
LINC00254-201ENST00000563416 RSPH14Q9UHP6 348 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 OR1A2Q9Y585 309 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 U3KQA8 63 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 CFAP47Q6ZTR5 3102 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 CCDC88CQ9P219 2028 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 APC2O95996 2303 aa4.17□□□□□ -1.74
LINC00254-201ENST00000563416 CELSR3Q9NYQ7 3312 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 DSPP15924 2871 aaKnown RBP4.16□□□□□ -1.74
LINC00254-201ENST00000563416 NBEAQ8NFP9 2946 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 ITPR1Q14643 2758 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 A0A087X0K7 114 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 SPAARA0A1B0GVQ0 90 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 USP27XA6NNY8 438 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 F8VVB4 439 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 F8VWA3 439 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 SDC3O75056 442 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 ATP6AP2O75787 350 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 ZFAND5O76080 213 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 NXPH2O95156 264 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 LDOC1O95751 146 aaPredicted RBP4.16□□□□□ -1.74
LINC00254-201ENST00000563416 AP2A1O95782 977 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 FGGP02679 453 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 KRT6BP04259 564 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 IVLP07476 585 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 PIRTP0C851 137 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 TPBGLP0DKB5 382 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 SMIM18P0DKX4 95 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 JAK1P23458 1154 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 ELAVL4P26378 380 aaKnown RBP4.16□□□□□ -1.74
LINC00254-201ENST00000563416 STIP1P31948 543 aaKnown RBP4.16□□□□□ -1.74
LINC00254-201ENST00000563416 MAGEA4P43358 317 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 MAGEB1P43366 347 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 GPR1P46091 355 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 KRT6CP48668 564 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 HNMTP50135 292 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 SMSP52788 366 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 SLC34A1Q06495 639 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 CCDC173Q0VFZ6 552 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 ILKQ13418 452 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 VEZF1Q14119 521 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 PARP6Q2NL67 630 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 ZNF542PQ5EBM4 170 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 WLSQ5T9L3 541 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 LCN1P1Q5VSP4 162 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 PDPK2PQ6A1A2 396 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 RAET1GQ6H3X3 334 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 DLEU7Q6UYE1 221 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 TMEM126BQ8IUX1 230 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 LACC1Q8IV20 430 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 SLC35F6Q8N357 371 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 EID2Q8N6I1 236 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 BMPERQ8N8U9 685 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 THAP8Q8NA92 274 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 MAPK1IP1LQ8NDC0 245 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 GPR26Q8NDV2 337 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 OR56A4Q8NGH8 313 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 OR10G8Q8NGN5 311 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 MAIP1Q8WWC4 291 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 OR1E3Q8WZA6 343 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 TSACCQ96A04 125 aaPredicted RBP4.16□□□□□ -1.74
LINC00254-201ENST00000563416 PYCR2Q96C36 320 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 MOCOSQ96EN8 888 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 THOC1Q96FV9 657 aaKnown RBP4.16□□□□□ -1.74
LINC00254-201ENST00000563416 VPS35Q96QK1 796 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 KRT12Q99456 494 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 ZNF559Q9BR84 538 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 TMEM121Q9BTD3 319 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 ZSCAN5AQ9BUG6 496 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 FICDQ9BVA6 458 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 RIOK2Q9BVS4 552 aaKnown RBP4.16□□□□□ -1.74
LINC00254-201ENST00000563416 OR2B2Q9GZK3 357 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 RAB17Q9H0T7 212 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 RIBC2Q9H4K1 309 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms