RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 TSFMP43897 325 aaKnown RBP12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 CAPZA2P47755 286 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 CDK5R1Q15078 307 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 TRMT12Q53H54 448 aaKnown RBP12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 METTL11BQ5VVY1 283 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 SLC39A5Q6ZMH5 540 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 ADGRG3Q86Y34 549 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 ZNF433Q8N7K0 673 aaPredicted RBP12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 FAM98AQ8NCA5 519 aaKnown RBP12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 OR2T4Q8NH00 348 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 ZCCHC10Q8TBK6 192 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 HMGB4Q8WW32 186 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 ORAI1Q96D31 301 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 SMIM19Q96E16 107 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 TNFRSF13CQ96RJ3 184 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 PDCD1LG2Q9BQ51 273 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 SEC22CQ9BRL7 303 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 CCDC86Q9H6F5 360 aaKnown RBP12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 AKAP7Q9P0M2 348 aaPredicted RBP12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 GNG8Q9UK08 70 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 NPTNQ9Y639 398 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 G3V3Q6 166 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 PRAF2O60831 178 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 RNGTTO60942 597 aaKnown RBP12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 PAK4O96013 591 aaPredicted RBP12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 IFNGP01579 166 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 NAT2P11245 290 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 NID1P14543 1247 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 SIRPAP78324 504 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 POU4F2Q12837 409 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 DCST2Q5T1A1 773 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 FIGNL1Q6PIW4 674 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 MEIOBQ8N635 442 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 ZNF614Q8N883 585 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 COX18Q8N8Q8 333 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 OR52E2Q8NGJ4 325 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 OR52I2Q8NH67 350 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 RAB7BQ96AH8 199 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 PELI1Q96FA3 418 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 ELMOD3Q96FG2 381 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 C10orf90Q96M02 699 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 EMC3Q9P0I2 261 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 ZNF69Q9UC07 566 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 POMT2Q9UKY4 750 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 MRPS23Q9Y3D9 190 aaKnown RBP12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 NOTCH4Q99466 2003 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 L7N2F9 121 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 CTDSPLO15194 276 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 TGM6O95932 706 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 ATP1B1P05026 303 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 PEBP1P30086 187 aaKnown RBP12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 MAT2AP31153 395 aaKnown RBP12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 TMEM255AQ5JRV8 349 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 APOOLQ6UXV4 268 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 PRSS42Q7Z5A4 293 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 OR2L13Q8N349 312 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 SDR9C7Q8NEX9 313 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 SLC2A12Q8TD20 617 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 SFXN2Q96NB2 322 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 C1QTNF6Q9BXI9 259 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 HDAC8Q9BY41 377 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 TMEM27Q9HBJ8 222 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 NRIP3Q9NQ35 241 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 MEPEQ9NQ76 525 aaPredicted RBP12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 KCMF1Q9P0J7 381 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 PCDHGA9Q9Y5G4 932 aaKnown RBP12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 SNRNP200O75643 2136 aaKnown RBP12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 OGG1O15527 345 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 NARSO43776 548 aaKnown RBP12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 SERPINI2O75830 405 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 TPPPO94811 219 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 LYPD3O95274 346 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 ECDO95905 644 aaPredicted RBP12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 UCHL1P09936 223 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 ACRP10323 421 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 PSMB10P40306 273 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 RAD52P43351 418 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 AP3S2P59780 193 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 TCEA2Q15560 299 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 C3P1Q6ZMU1 363 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 OVCH1Q7RTY7 1134 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 GPAT4Q86UL3 456 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 ETFBKMTQ8IXQ9 262 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 OR4K13Q8NH42 304 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 TEX101Q9BY14 249 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 ZNF350Q9GZX5 532 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 SLC25A18Q9H1K4 315 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 CAPN10Q9HC96 672 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 HAO2Q9NYQ3 351 aa12.89□□□□□ -0.35
VPS9D1-202ENST00000561976 OTOL1A6NHN0 477 aaPredicted RBP12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 ACSM4P0C7M7 580 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 ACTA2P62736 377 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 ACTG2P63267 376 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 TNFRSF17Q02223 184 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 IRF4Q15306 451 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 RPE65Q16518 533 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 DEFB134Q4QY38 66 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 MOSPD2Q8NHP6 518 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 GAL3ST3Q96A11 431 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 PPA2Q9H2U2 334 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms