RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 IGKV6D-41A0A0C4DH26 115 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 SMIM28A0A1B0GU29 152 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 B4DXG7 233 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 RS1O15537 224 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 IL1BP01584 269 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 STSP08842 583 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 NCK1P16333 377 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 POLR2EP19388 210 aaKnown RBP4.59□□□□□ -1.67
SMG1-204ENST00000561940 LEPP41159 167 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 OR3A4PP47883 348 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 NUP153P49790 1475 aaKnown RBP4.59□□□□□ -1.67
SMG1-204ENST00000561940 EFNA3P52797 238 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 BCL2L1Q07817 233 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 NWD1Q149M9 1564 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 PDK3Q15120 406 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 PRR4Q16378 134 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 NHSL1Q5SYE7 1610 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 ZSCAN25Q6NSZ9 544 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 Q6ZR54 194 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 SH2D6Q7Z4S9 175 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 CNPY4Q8N129 248 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 GPD1LQ8N335 351 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 ATP6V0D2Q8N8Y2 350 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 FAF2Q96CS3 445 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 IL4I1Q96RQ9 567 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 KIR2DL4Q99706 377 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 TMEM43Q9BTV4 400 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 RNF126Q9BV68 326 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 LRRN3Q9H3W5 708 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 EXTL2Q9UBQ6 330 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 WARS2Q9UGM6 360 aaKnown RBP4.59□□□□□ -1.67
SMG1-204ENST00000561940 VSIG4Q9Y279 399 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 DIP2CQ9Y2E4 1556 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 POLDIP2Q9Y2S7 368 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 TIMM10BQ9Y5J6 103 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 SLCO1B1Q9Y6L6 691 aa4.59□□□□□ -1.67
SMG1-204ENST00000561940 MYO3AQ8NEV4 1616 aa4.58□□□□□ -1.68
SMG1-204ENST00000561940 NCOA3Q9Y6Q9 1424 aa4.58□□□□□ -1.68
SMG1-204ENST00000561940 ZNF208O43345 1280 aa4.58□□□□□ -1.68
SMG1-204ENST00000561940 N4BP1O75113 896 aaKnown RBP4.58□□□□□ -1.68
SMG1-204ENST00000561940 GNA14O95837 355 aa4.58□□□□□ -1.68
SMG1-204ENST00000561940 OR8U8P0C7N1 319 aa4.58□□□□□ -1.68
SMG1-204ENST00000561940 IGLL1P15814 213 aa4.58□□□□□ -1.68
SMG1-204ENST00000561940 UGT1A3P35503 534 aa4.58□□□□□ -1.68
SMG1-204ENST00000561940 AIF1P55008 147 aa4.58□□□□□ -1.68
SMG1-204ENST00000561940 RPS8P62241 208 aaKnown RBP4.58□□□□□ -1.68
SMG1-204ENST00000561940 TRIM16LQ309B1 348 aa4.58□□□□□ -1.68
SMG1-204ENST00000561940 LRRC23Q53EV4 343 aaPredicted RBP4.58□□□□□ -1.68
SMG1-204ENST00000561940 OR2B11Q5JQS5 317 aa4.58□□□□□ -1.68
SMG1-204ENST00000561940 PAGE2BQ5JRK9 111 aa4.58□□□□□ -1.68
SMG1-204ENST00000561940 ATL3Q6DD88 541 aa4.58□□□□□ -1.68
SMG1-204ENST00000561940 FRA10AC1Q70Z53 315 aa4.58□□□□□ -1.68
SMG1-204ENST00000561940 APOBEC3FQ8IUX4 373 aaKnown RBP4.58□□□□□ -1.68
SMG1-204ENST00000561940 CADM2Q8N3J6 435 aa4.58□□□□□ -1.68
SMG1-204ENST00000561940 EIF1ADQ8N9N8 165 aaKnown RBP4.58□□□□□ -1.68
SMG1-204ENST00000561940 OR5D13Q8NGL4 314 aa4.58□□□□□ -1.68
SMG1-204ENST00000561940 SHC3Q92529 594 aa4.58□□□□□ -1.68
SMG1-204ENST00000561940 SLC41A3Q96GZ6 507 aa4.58□□□□□ -1.68
SMG1-204ENST00000561940 KLHL21Q9UJP4 597 aa4.58□□□□□ -1.68
SMG1-204ENST00000561940 CLEC4EQ9ULY5 219 aa4.58□□□□□ -1.68
SMG1-204ENST00000561940 ASB3Q9Y575 518 aa4.58□□□□□ -1.68
SMG1-204ENST00000561940 BCL9LQ86UU0 1499 aa4.57□□□□□ -1.68
SMG1-204ENST00000561940 A0A1B0GWB2 263 aa4.57□□□□□ -1.68
SMG1-204ENST00000561940 WWP2O00308 870 aa4.57□□□□□ -1.68
SMG1-204ENST00000561940 SURF6O75683 361 aaKnown RBP4.57□□□□□ -1.68
SMG1-204ENST00000561940 P0C879 139 aa4.57□□□□□ -1.68
SMG1-204ENST00000561940 PRKAR2BP31323 418 aa4.57□□□□□ -1.68
SMG1-204ENST00000561940 HLCSP50747 726 aa4.57□□□□□ -1.68
SMG1-204ENST00000561940 RPS14P62263 151 aaKnown RBP4.57□□□□□ -1.68
SMG1-204ENST00000561940 GANABQ14697 944 aaKnown RBP4.57□□□□□ -1.68
SMG1-204ENST00000561940 EXOC3L2Q2M3D2 409 aa4.57□□□□□ -1.68
SMG1-204ENST00000561940 TRPM8Q7Z2W7 1104 aa4.57□□□□□ -1.68
SMG1-204ENST00000561940 C17orf82Q86X59 251 aaPredicted RBP4.57□□□□□ -1.68
SMG1-204ENST00000561940 OR2L13Q8N349 312 aa4.57□□□□□ -1.68
SMG1-204ENST00000561940 TBX15Q96SF7 602 aa4.57□□□□□ -1.68
SMG1-204ENST00000561940 NIPSNAP3BQ9BS92 247 aa4.57□□□□□ -1.68
SMG1-204ENST00000561940 CAPS2Q9BXY5 557 aa4.57□□□□□ -1.68
SMG1-204ENST00000561940 Q9H3A6 140 aa4.57□□□□□ -1.68
SMG1-204ENST00000561940 TNFRSF19Q9NS68 423 aa4.57□□□□□ -1.68
SMG1-204ENST00000561940 TP53TG3Q9ULZ0 132 aa4.57□□□□□ -1.68
SMG1-204ENST00000561940 ERVW-1Q9UQF0 538 aa4.57□□□□□ -1.68
SMG1-204ENST00000561940 CA5BQ9Y2D0 317 aa4.57□□□□□ -1.68
SMG1-204ENST00000561940 RAPGEF6Q8TEU7 1601 aa4.57□□□□□ -1.68
SMG1-204ENST00000561940 UGGT1Q9NYU2 1555 aa4.57□□□□□ -1.68
SMG1-204ENST00000561940 ABCC3O15438 1527 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 ATP7AQ04656 1500 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 RLFQ13129 1914 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 NINLQ9Y2I6 1382 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 IGLV3-10A0A075B6K4 115 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 TRAV26-1A0A087WT03 109 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 TUBAL3A6NHL2 446 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 KLK2P20151 261 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 ZP3P21754 424 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 FGF9P31371 208 aaPredicted RBP4.56□□□□□ -1.68
SMG1-204ENST00000561940 TAGLN2P37802 199 aaKnown RBP4.56□□□□□ -1.68
SMG1-204ENST00000561940 KIR2DS2P43631 304 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 RIPK1Q13546 671 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 AANATQ16613 207 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 CEP55Q53EZ4 464 aa4.56□□□□□ -1.68
SMG1-204ENST00000561940 ZNF658Q5TYW1 1059 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms