RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 TAPBPO15533 448 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 BCAS2O75934 225 aaPredicted RBP4.54□□□□□ -1.68
HERC1-213ENST00000561359 MPIG6BO95866 241 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 AHSGP02765 367 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 OPN1MWP04001 364 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 ITGA5P08648 1049 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 OPN1MW2P0DN77 364 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 OPN1MW3P0DN78 364 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 TCN1P20061 433 aaPredicted RBP4.54□□□□□ -1.68
HERC1-213ENST00000561359 NPR2P20594 1047 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 PSMA4P25789 261 aaKnown RBP4.54□□□□□ -1.68
HERC1-213ENST00000561359 CALRP27797 417 aaKnown RBP4.54□□□□□ -1.68
HERC1-213ENST00000561359 SLC7A1P30825 629 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 GGT5P36269 586 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 PIK3CBP42338 1070 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 MTNR1AP48039 350 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 ARFIP1P53367 373 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 FOXG1P55316 489 aaPredicted RBP4.54□□□□□ -1.68
HERC1-213ENST00000561359 GPX6P59796 221 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 PHEXP78562 749 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 SLC25A3Q00325 362 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 TGFBR3Q03167 851 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 ZNF155Q12901 538 aaPredicted RBP4.54□□□□□ -1.68
HERC1-213ENST00000561359 TGFBIQ15582 683 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 DECR1Q16698 335 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 SLC9B1Q4ZJI4 515 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 ELFN2Q5R3F8 820 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 FAM180BQ6P0A1 224 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 C4orf22Q6V702 233 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 GSTA5Q7RTV2 222 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 LRRC70Q7Z2Q7 622 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 R3HCC1LQ7Z5L2 792 aaKnown RBP4.54□□□□□ -1.68
HERC1-213ENST00000561359 NUDT13Q86X67 352 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 GSPT2Q8IYD1 628 aaKnown RBP4.54□□□□□ -1.68
HERC1-213ENST00000561359 CDK20Q8IZL9 346 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 TCAIMQ8N3R3 496 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 NKAPQ8N5F7 415 aaKnown RBP4.54□□□□□ -1.68
HERC1-213ENST00000561359 UBL4BQ8N7F7 174 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 GATSQ8NAP1 163 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 SLC16A11Q8NCK7 471 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 CKAP2Q8WWK9 683 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 ZNF75CPQ92670 426 aaPredicted RBP4.54□□□□□ -1.68
HERC1-213ENST00000561359 RDH5Q92781 318 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 APH1AQ96BI3 265 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 KLHL29Q96CT2 875 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 VSTM2LQ96N03 204 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 ANKRD27Q96NW4 1050 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 FRMD8P1Q9BZ68 369 aaPredicted RBP4.54□□□□□ -1.68
HERC1-213ENST00000561359 MS4A7Q9GZW8 240 aaPredicted RBP4.54□□□□□ -1.68
HERC1-213ENST00000561359 MED4Q9NPJ6 270 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 SLC17A5Q9NRA2 495 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 ZNF275Q9NSD4 429 aaPredicted RBP4.54□□□□□ -1.68
HERC1-213ENST00000561359 EMC3Q9P0I2 261 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 ASH2LQ9UBL3 628 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 UTS2RQ9UKP6 389 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 PSME2Q9UL46 239 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 NOSIPQ9Y314 301 aaKnown RBP4.54□□□□□ -1.68
HERC1-213ENST00000561359 PCDHGB5Q9Y5G0 923 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 ZNF780BQ9Y6R6 833 aa4.54□□□□□ -1.68
HERC1-213ENST00000561359 SACSQ9NZJ4 4579 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 DYNC2H1Q8NCM8 4307 aaKnown RBP4.53□□□□□ -1.68
HERC1-213ENST00000561359 IGHV1-18A0A0C4DH31 117 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 TMEM129A0AVI4 362 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 ZNF195O14628 629 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 CYTIPO60759 359 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 ERLIN1O75477 346 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 NDUFA7O95182 113 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 UTS2O95399 124 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 KLK1P06870 262 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 TPM1P09493 284 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 ZNF37AP17032 561 aaPredicted RBP4.53□□□□□ -1.68
HERC1-213ENST00000561359 CDH2P19022 906 aaPredicted RBP4.53□□□□□ -1.68
HERC1-213ENST00000561359 EPORP19235 508 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 THBS4P35443 961 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 EIF1P41567 113 aaKnown RBP4.53□□□□□ -1.68
HERC1-213ENST00000561359 ALDH9A1P49189 494 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 ATP4BP51164 291 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 RAC3P60763 192 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 LCN2P80188 198 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 SLC18A2Q05940 514 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 CD69Q07108 199 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 FOXF1Q12946 379 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 PDCD1Q15116 288 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 KCTD19Q17RG1 926 aaPredicted RBP4.53□□□□□ -1.68
HERC1-213ENST00000561359 DEFB121Q5J5C9 76 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 AVPI1Q5T686 147 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 SULT1C3Q6IMI6 304 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 FAM45BPQ6NSW5 357 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 SLC48A1Q6P1K1 146 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 TRMT10BQ6PF06 316 aaKnown RBP4.53□□□□□ -1.68
HERC1-213ENST00000561359 APOOLQ6UXV4 268 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 WDFY1Q8IWB7 410 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 TXLNBQ8N3L3 684 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 C17orf78Q8N4C9 275 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 OR4F15Q8NGB8 312 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 POC1BQ8TC44 478 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 FAM45AQ8TCE6 357 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 ZFP90Q8TF47 636 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 JADE3Q92613 823 aa4.53□□□□□ -1.68
HERC1-213ENST00000561359 POP5Q969H6 163 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms