RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 PRR14Q9BWN1 585 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 SPATA9Q9BWV2 254 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 RNF122Q9H9V4 155 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 EXOSC3Q9NQT5 275 aaKnown RBP9.06□□□□□ -0.96
HERC1-212ENST00000561348 MRGBPQ9NV56 204 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 GID8Q9NWU2 228 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 KLHL28Q9NXS3 571 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 GALNT8Q9NY28 637 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 KLHL13Q9P2N7 655 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 CHRNA9Q9UGM1 479 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 TRBV5-3A0A0A0MS03 114 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 TMEM72A0PK05 275 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 PRORSD1PA6NEY8 169 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 BBIP1A8MTZ0 92 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 M0QX08 132 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 SYT5O00445 386 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 TPST1O60507 370 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 TNFSF13O75888 250 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 PRKD3O94806 890 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 IL18BPO95998 194 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 FESP07332 822 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 THBS1P07996 1170 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 BMP2P12643 396 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 COX4I1P13073 169 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 POU2F1P14859 743 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 KLK2P20151 261 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 SLC1A3P43003 542 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 KIR2DL2P43627 348 aaPredicted RBP9.05□□□□□ -0.96
HERC1-212ENST00000561348 HTR3AP46098 478 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 RGS8P57771 180 aaPredicted RBP9.05□□□□□ -0.96
HERC1-212ENST00000561348 CSNK2A1P68400 391 aaPredicted RBP9.05□□□□□ -0.96
HERC1-212ENST00000561348 IL1RL1Q01638 556 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 FAM27E3Q08E93 113 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 ZNF239Q16600 458 aaKnown RBP9.05□□□□□ -0.96
HERC1-212ENST00000561348 SLC25A53Q5H9E4 307 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 RNF220Q5VTB9 566 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 WBP2NLQ6ICG8 309 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 NANOGP8Q6NSW7 305 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 ADGRG3Q86Y34 549 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 TUSC5Q8IXB3 177 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 DMRTC2Q8IXT2 367 aaPredicted RBP9.05□□□□□ -0.96
HERC1-212ENST00000561348 OR52E4Q8NGH9 312 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 SLC25A43Q8WUT9 341 aaPredicted RBP9.05□□□□□ -0.96
HERC1-212ENST00000561348 OIT3Q8WWZ8 545 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 PMM1Q92871 262 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 SLC25A36Q96CQ1 311 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 DDIT4LQ96D03 193 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 ZHX1-C8orf76Q96EF9 292 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 GMPPAQ96IJ6 420 aaPredicted RBP9.05□□□□□ -0.96
HERC1-212ENST00000561348 ADGRG7Q96K78 797 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 SH3GL1Q99961 368 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 SPOCK3Q9BQ16 436 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 CCDC106Q9BWC9 280 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 ENKD1Q9H0I2 346 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 PIGMQ9H3S5 423 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 TMEM38AQ9H6F2 299 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 COQ10BQ9H8M1 238 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 NANOGQ9H9S0 305 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 BCL2L10Q9HD36 194 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 ADPRHL2Q9NX46 363 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 SELENONQ9NZV5 590 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 C6orf203Q9P0P8 240 aaPredicted RBP9.05□□□□□ -0.96
HERC1-212ENST00000561348 OSGIN1Q9UJX0 560 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 USP22Q9UPT9 525 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 CRYBG3Q68DQ2 2970 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 DSPPQ9NZW4 1301 aa9.05□□□□□ -0.96
HERC1-212ENST00000561348 ELOA3DA6NLF2 546 aaPredicted RBP9.04□□□□□ -0.96
HERC1-212ENST00000561348 CCT8L1PA6NM43 557 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 CASKO14936 926 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 GSTA4O15217 222 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 CRHP06850 196 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 ETS2P15036 469 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 FPR1P21462 350 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 DRD4P21917 467 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 CBLP22681 906 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 ACAA2P42765 397 aaKnown RBP9.04□□□□□ -0.96
HERC1-212ENST00000561348 NUDT2P50583 147 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 RAC3P60763 192 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 DMTNQ08495 405 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 RASGEF1BQ0VAM2 473 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 POU4F3Q15319 338 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 OR7A5Q15622 319 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 ADRM1Q16186 407 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 ELOA3BQ3SY89 546 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 LRRC23Q53EV4 343 aaPredicted RBP9.04□□□□□ -0.96
HERC1-212ENST00000561348 EEF1A1P5Q5VTE0 462 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 PRAMEF8Q5VWM4 474 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 PRAMEF7Q5VXH5 474 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 TMPPEQ6ZT21 453 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 STK32CQ86UX6 486 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 PTOV1Q86YD1 416 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 P3H2Q8IVL5 708 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 ZNF100Q8IYN0 542 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 C10orf53Q8N6V4 93 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 ELOA3Q8NG57 546 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 RP9Q8TA86 221 aaKnown RBP9.04□□□□□ -0.96
HERC1-212ENST00000561348 KAT8Q9H7Z6 458 aaKnown RBP9.04□□□□□ -0.96
HERC1-212ENST00000561348 CRIM1Q9NZV1 1036 aa9.04□□□□□ -0.96
HERC1-212ENST00000561348 FOXD3Q9UJU5 478 aaPredicted RBP9.04□□□□□ -0.96
HERC1-212ENST00000561348 MPDZO75970 2070 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms