RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 TRAV27A0A087WT01 109 aa15.25■□□□□ 0.03
TPM1-228ENST00000560975 NAP1L6A6NFF2 107 aa15.25■□□□□ 0.03
TPM1-228ENST00000560975 ACOD1A6NK06 481 aa15.25■□□□□ 0.03
TPM1-228ENST00000560975 H7C2Y5 167 aa15.25■□□□□ 0.03
TPM1-228ENST00000560975 NRG2O14511 850 aaPredicted RBP15.25■□□□□ 0.03
TPM1-228ENST00000560975 GKN3PP0CG01 181 aa15.25■□□□□ 0.03
TPM1-228ENST00000560975 MST1P26927 711 aa15.25■□□□□ 0.03
TPM1-228ENST00000560975 DLX5P56178 289 aa15.25■□□□□ 0.03
TPM1-228ENST00000560975 UBXN2BQ14CS0 331 aa15.25■□□□□ 0.03
TPM1-228ENST00000560975 TMEM69Q5SWH9 247 aa15.25■□□□□ 0.03
TPM1-228ENST00000560975 FAM46CQ5VWP2 391 aa15.25■□□□□ 0.03
TPM1-228ENST00000560975 ASPGQ86U10 573 aa15.25■□□□□ 0.03
TPM1-228ENST00000560975 NUP43Q8NFH3 380 aa15.25■□□□□ 0.03
TPM1-228ENST00000560975 ZMYND19Q96E35 227 aaPredicted RBP15.25■□□□□ 0.03
TPM1-228ENST00000560975 PAWRQ96IZ0 340 aaKnown RBP15.25■□□□□ 0.03
TPM1-228ENST00000560975 HS6ST2Q96MM7 605 aa15.25■□□□□ 0.03
TPM1-228ENST00000560975 MFFQ9GZY8 342 aa15.25■□□□□ 0.03
TPM1-228ENST00000560975 NOX4Q9NPH5 578 aa15.25■□□□□ 0.03
TPM1-228ENST00000560975 TMEM138Q9NPI0 162 aa15.25■□□□□ 0.03
TPM1-228ENST00000560975 PCYT1BQ9Y5K3 369 aaPredicted RBP15.25■□□□□ 0.03
TPM1-228ENST00000560975 NUP210Q8TEM1 1887 aaPredicted RBP15.24■□□□□ 0.03
TPM1-228ENST00000560975 TCF20Q9UGU0 1960 aaKnown RBP15.24■□□□□ 0.03
TPM1-228ENST00000560975 UBE2QL1A1L167 161 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 NAA10P41227 235 aaPredicted RBP15.24■□□□□ 0.03
TPM1-228ENST00000560975 WDR88Q6ZMY6 472 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 ZNF547Q8IVP9 402 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 TEX19Q8NA77 164 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 OR9A2Q8NGT5 310 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 SOCS4Q8WXH5 440 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 RAD51AP1Q96B01 352 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 LMLNQ96KR4 655 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 PRDM9Q9NQV7 894 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 COL4A3Q01955 1670 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 TRBV2A0A0J9YWF9 115 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 CENPVL1A0A0U1RR11 272 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 F5H5P2 479 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 MAN2B1O00754 1011 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 SIGLEC6O43699 453 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 LILRB5O75023 590 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 ABLIM3O94929 683 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 PCDH8O95206 1070 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 SERPINA3P01011 423 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 TYRP14679 529 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 P2RX1P51575 399 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 EPHB3P54753 998 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 MLC1Q15049 377 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 LTB4RQ15722 352 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 PABPC1L2AQ5JQF8 200 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 ZC3H14Q6PJT7 736 aaKnown RBP15.24■□□□□ 0.03
TPM1-228ENST00000560975 SYNPRQ8TBG9 265 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 PLEKHA1Q9HB21 404 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 IL21Q9HBE4 155 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 ERVK-19Q9WJR5 959 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 ATG4BQ9Y4P1 393 aa15.24■□□□□ 0.03
TPM1-228ENST00000560975 ANKRD20A5PA0PJZ0 165 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 HMSDA8MTL9 139 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 ABCD4O14678 606 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 ACADLP28330 430 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 PTH2RP49190 550 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 GPR85P60893 370 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 MPP7Q5T2T1 576 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 HTR3DQ70Z44 454 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 MCATQ8IVS2 390 aaKnown RBP15.23■□□□□ 0.03
TPM1-228ENST00000560975 OR8K3Q8NH51 312 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 STK35Q8TDR2 534 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 NR4A3Q92570 626 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 GFI1Q99684 422 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 FN3KQ9H479 309 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 FANCFQ9NPI8 374 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 NRIP3Q9NQ35 241 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 INPP5EQ9NRR6 644 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 GNG8Q9UK08 70 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 SLC6A5Q9Y345 797 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 KLF2Q9Y5W3 355 aaPredicted RBP15.23■□□□□ 0.03
TPM1-228ENST00000560975 HEATR5BQ9P2D3 2071 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 PSMD9O00233 223 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 SMAD9O15198 467 aaKnown RBP15.23■□□□□ 0.03
TPM1-228ENST00000560975 PLXNA2O75051 1894 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 CDC123O75794 336 aaPredicted RBP15.23■□□□□ 0.03
TPM1-228ENST00000560975 NDUFB6O95139 128 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 PPP1R3DO95685 299 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 EDNRAP25101 427 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 CSRP2Q16527 193 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 EIF4E3Q8N5X7 224 aaKnown RBP15.23■□□□□ 0.03
TPM1-228ENST00000560975 DOK4Q8TEW6 326 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 SLC25A28Q96A46 364 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 PELI1Q96FA3 418 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 AICDAQ9GZX7 198 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 C6orf106Q9H6K1 298 aaPredicted RBP15.23■□□□□ 0.03
TPM1-228ENST00000560975 CMC2Q9NRP2 79 aa15.23■□□□□ 0.03
TPM1-228ENST00000560975 MRPL17Q9NRX2 175 aaKnown RBP15.23■□□□□ 0.03
TPM1-228ENST00000560975 A0A1W2PR48 441 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 ANKRD61A6NGH8 418 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 H0YC42 278 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 PRAMEF2O60811 474 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 ART1P52961 327 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 METAP1P53582 386 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 RPS11P62280 158 aaKnown RBP eCLIP15.22■□□□□ 0.03
TPM1-228ENST00000560975 STX4Q12846 297 aa15.22■□□□□ 0.03
TPM1-228ENST00000560975 TPGS2Q68CL5 300 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms