RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 SLAMF8Q9P0V8 285 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 NTMQ9P121 344 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 MCTS1Q9ULC4 181 aaKnown RBP12.17□□□□□ -0.46
SMAD3-214ENST00000560402 PCDHB14Q9Y5E9 798 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 HEATR5AQ86XA9 2040 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 CLIC1O00299 241 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 CXCR6O00574 342 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 SS18L1O75177 396 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-214ENST00000560402 OXSR1O95747 527 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-214ENST00000560402 RPSAP08865 295 aaKnown RBP12.16□□□□□ -0.46
SMAD3-214ENST00000560402 TBXA2RP21731 343 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 FRKP42685 505 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-214ENST00000560402 PDE7AQ13946 482 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 LRRC36Q1X8D7 754 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 BEX5Q5H9J7 111 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 LPCAT4Q643R3 524 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 CLEC9AQ6UXN8 241 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 GTPBP8Q8N3Z3 284 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-214ENST00000560402 PACRGLQ8N7B6 248 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 OR5M1Q8NGP8 315 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 GPR151Q8TDV0 419 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 CANT1Q8WVQ1 401 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 ZNF583Q96ND8 569 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 PKP2Q99959 881 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 BDH2Q9BUT1 245 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 C9orf16Q9BUW7 83 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 PRRG4Q9BZD6 226 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 OR10A4Q9H209 315 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 KAT8Q9H7Z6 458 aaKnown RBP12.16□□□□□ -0.46
SMAD3-214ENST00000560402 UBTD1Q9HAC8 227 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 EQTNQ9NQ60 294 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 BATF3Q9NR55 127 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 ACSS1Q9NUB1 689 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-214ENST00000560402 SLC25A37Q9NYZ2 338 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 RPS6KA6Q9UK32 745 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 VDAC3Q9Y277 283 aa12.16□□□□□ -0.46
SMAD3-214ENST00000560402 A0A1W2PQD3 144 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 GXYLT2A0PJZ3 443 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 EIF1AYO14602 144 aaKnown RBP12.15□□□□□ -0.46
SMAD3-214ENST00000560402 NDUFB5O43674 189 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 DEAF1O75398 565 aaPredicted RBP12.15□□□□□ -0.46
SMAD3-214ENST00000560402 AQP8O94778 261 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 SYNGR4O95473 234 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 KRT75O95678 551 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 PLGP00747 810 aaPredicted RBP12.15□□□□□ -0.46
SMAD3-214ENST00000560402 IGKV1D-16P01601 117 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 GSNP06396 782 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 RAP2AP10114 183 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 LAMP1P11279 417 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 NCK1P16333 377 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 EIF1AXP47813 144 aaKnown RBP12.15□□□□□ -0.46
SMAD3-214ENST00000560402 ZNF41P51814 821 aaPredicted RBP12.15□□□□□ -0.46
SMAD3-214ENST00000560402 NR1H2P55055 460 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 CTBP2P56545 445 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 MED21Q13503 144 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 PDSS1Q5T2R2 415 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 ZCCHC12Q6PEW1 402 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 ESPNLQ6ZVH7 1005 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 ZNF551Q7Z340 670 aaPredicted RBP12.15□□□□□ -0.46
SMAD3-214ENST00000560402 ZNF550Q7Z398 422 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 SLC30A8Q8IWU4 369 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 ADGRG5Q8IZF4 528 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 ANKFN1Q8N957 763 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 ZNF610Q8N9Z0 462 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 PAPD5Q8NDF8 572 aaKnown RBP12.15□□□□□ -0.46
SMAD3-214ENST00000560402 NUP43Q8NFH3 380 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 PIK3R3Q92569 461 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 CENPNQ96H22 339 aaPredicted RBP12.15□□□□□ -0.46
SMAD3-214ENST00000560402 ADGRG7Q96K78 797 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 RNF145Q96MT1 663 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 ZNF570Q96NI8 536 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 NR1H4Q96RI1 486 aaPredicted RBP12.15□□□□□ -0.46
SMAD3-214ENST00000560402 INPP5KQ9BT40 448 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 PIF1Q9H611 641 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 MAGIXQ9H6Y5 334 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 PLSCR4Q9NRQ2 329 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 RAB26Q9ULW5 256 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 SAMD4AQ9UPU9 718 aaKnown RBP12.15□□□□□ -0.46
SMAD3-214ENST00000560402 GMEB1Q9Y692 573 aa12.15□□□□□ -0.46
SMAD3-214ENST00000560402 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 SCDO00767 359 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 TIPRLO75663 272 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 BMP2P12643 396 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 UQCRBP14927 111 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 HPGDP15428 266 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 GPX2P18283 190 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 IL11P20809 199 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 LOXP28300 417 aaPredicted RBP12.14□□□□□ -0.47
SMAD3-214ENST00000560402 ELK4P28324 431 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 CHI3L1P36222 383 aaPredicted RBP12.14□□□□□ -0.47
SMAD3-214ENST00000560402 PRIM2P49643 509 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 MANFP55145 182 aaKnown RBP12.14□□□□□ -0.47
SMAD3-214ENST00000560402 RAC1P63000 192 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 PHC1P78364 1004 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 SELPLGQ14242 412 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 PLPPR5Q32ZL2 321 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 PPP4R4Q6NUP7 873 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 MFSD12Q6NUT3 480 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 APOOLQ6UXV4 268 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 SZRD1Q7Z422 152 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms