RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 METRNLQ641Q3 311 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 IL17RDQ8NFM7 739 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 MAFIPQ8WZ33 124 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 TOMM40LQ969M1 308 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 SLC41A2Q96JW4 573 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 OR52D1Q9H346 318 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 RANBP3Q9H6Z4 567 aaPredicted RBP12.56□□□□□ -0.4
TRAF3-208ENST00000560371 GORASP2Q9H8Y8 452 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 PLEKHA3Q9HB20 300 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 C14orf119Q9NWQ9 140 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 IGLV3-10A0A075B6K4 115 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 M0R233 179 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 F13BP05160 661 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 TECPR1Q7Z6L1 1165 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 ZNF587Q96SQ5 575 aaPredicted RBP12.56□□□□□ -0.4
TRAF3-208ENST00000560371 ZNF223Q9UK11 482 aaPredicted RBP12.56□□□□□ -0.4
TRAF3-208ENST00000560371 A0A1B0GX78 115 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 KNG1P01042 644 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 ADH6P28332 368 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 ZNF181Q2M3W8 571 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 CFAP77Q6ZQR2 320 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 VN1R3Q9BXE9 311 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 COQ3Q9NZJ6 369 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 HHLA2Q9UM44 414 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 A0A1W2PQL4 384 aaPredicted RBP12.55□□□□□ -0.4
TRAF3-208ENST00000560371 ANKRD34BA5PLL1 514 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 HMX3A6NHT5 357 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 SHOXO15266 292 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 HTR5AP47898 357 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 S100A12P80511 92 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 OR8J2Q8NGG1 315 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 GLYATL2Q8WU03 294 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 IL1F10Q8WWZ1 152 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 MICU1Q9BPX6 476 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 MRI1Q9BV20 369 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 MRPS2Q9Y399 296 aaKnown RBP12.55□□□□□ -0.4
TRAF3-208ENST00000560371 TNFRSF10CO14798 259 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 ARSBP15848 533 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 EXT1Q16394 746 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 NKAIN1Q4KMZ8 207 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 PODNL1Q6PEZ8 512 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 AAED1Q7RTV5 226 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 FOXN4Q96NZ1 517 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 C1orf198Q9H425 327 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 SLCO2B1O94956 709 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 DPP4P27487 766 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 CDK5R2Q13319 367 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 IFI44Q8TCB0 444 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 CACNG6Q9BXT2 260 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 FOXQ1Q9C009 403 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 G3V3Y1 287 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 SERPINE2P07093 398 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 DHRS4L1P0CG22 281 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 CARD18P57730 90 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 ADARB1P78563 741 aaKnown RBP12.55□□□□□ -0.4
TRAF3-208ENST00000560371 NTRK2Q16620 822 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 NIPAL3Q6P499 406 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 FAM111BQ6SJ93 734 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 FAM160A2Q8N612 972 aaPredicted RBP12.55□□□□□ -0.4
TRAF3-208ENST00000560371 ESX1Q8N693 406 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 VRK1Q99986 396 aaPredicted RBP12.55□□□□□ -0.4
TRAF3-208ENST00000560371 HAO2Q9NYQ3 351 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 IL37Q9NZH6 218 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 A0A087WUU8 490 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 HHLA1C9JL84 531 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 TPOP07202 933 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 GABRR1P24046 479 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 ETV4P43268 484 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 BMXP51813 675 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 PLAG1Q6DJT9 500 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 TMEM150AQ86TG1 271 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 FAM217AQ8IXS0 508 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 C4orf36Q96KX1 117 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 FUNDC2Q9BWH2 189 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 TXLNGYQ9BZA5 131 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 CALHM2Q9HA72 323 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 MMACHCQ9Y4U1 282 aa12.55□□□□□ -0.4
TRAF3-208ENST00000560371 ARNTLO00327 626 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 RAB4BP61018 213 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 RHEBQ15382 184 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 TBRG1Q3YBR2 411 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 TMEM52BQ4KMG9 183 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 KCTD11Q693B1 232 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 FAM83HQ6ZRV2 1179 aaPredicted RBP12.54□□□□□ -0.4
TRAF3-208ENST00000560371 GTF2H4Q92759 462 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 PDXPQ96GD0 296 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 ZNF845Q96IR2 970 aaPredicted RBP12.54□□□□□ -0.4
TRAF3-208ENST00000560371 PRDM9Q9NQV7 894 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 ANKRD10Q9NXR5 420 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 MAB21L2Q9Y586 359 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 TMEM269A0A1B0GVZ9 245 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 TRAPPC2LH3BP13 241 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 BCAS1O75363 584 aaPredicted RBP12.54□□□□□ -0.4
TRAF3-208ENST00000560371 ETV5P41161 510 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 POLE4Q9NR33 117 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 CYB5BO43169 146 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 ERP29P30040 261 aaKnown RBP12.54□□□□□ -0.4
TRAF3-208ENST00000560371 SLC35A1P78382 337 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 C2orf76Q3KRA6 126 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 ZNF695Q8IW36 515 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms