RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 SLC43A2Q8N370 569 aa15.68■□□□□ 0.1
HDDC3-205ENST00000559898 STEAP2Q8NFT2 490 aa15.68■□□□□ 0.1
HDDC3-205ENST00000559898 KBTBD8Q8NFY9 601 aa15.68■□□□□ 0.1
HDDC3-205ENST00000559898 WDR60Q8WVS4 1066 aa15.68■□□□□ 0.1
HDDC3-205ENST00000559898 TMEM234Q8WY98 164 aa15.68■□□□□ 0.1
HDDC3-205ENST00000559898 C18orf12Q96KH6 178 aa15.68■□□□□ 0.1
HDDC3-205ENST00000559898 EBF4Q9BQW3 602 aa15.68■□□□□ 0.1
HDDC3-205ENST00000559898 SLCO1B3Q9NPD5 702 aa15.68■□□□□ 0.1
HDDC3-205ENST00000559898 EXOSC3Q9NQT5 275 aaKnown RBP15.68■□□□□ 0.1
HDDC3-205ENST00000559898 SERINC1Q9NRX5 453 aa15.68■□□□□ 0.1
HDDC3-205ENST00000559898 NKIRAS1Q9NYS0 192 aa15.68■□□□□ 0.1
HDDC3-205ENST00000559898 NPAP1Q9NZP6 1156 aa15.68■□□□□ 0.1
HDDC3-205ENST00000559898 KLHL9Q9P2J3 617 aa15.68■□□□□ 0.1
HDDC3-205ENST00000559898 TMED7Q9Y3B3 224 aa15.68■□□□□ 0.1
HDDC3-205ENST00000559898 CADP27708 2225 aa15.68■□□□□ 0.1
HDDC3-205ENST00000559898 A0A1W2PR80 420 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 H7C1Q1 480 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 HS3ST1O14792 307 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 SMAD7O15105 426 aaKnown RBP15.67■□□□□ 0.1
HDDC3-205ENST00000559898 INHBBP09529 407 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 FOSL1P15407 271 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 HOXB9P17482 250 aaPredicted RBP15.67■□□□□ 0.1
HDDC3-205ENST00000559898 FPR1P21462 350 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 IL32P24001 234 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 TACR3P29371 465 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 APOBEC1P41238 236 aaKnown RBP15.67■□□□□ 0.1
HDDC3-205ENST00000559898 NR1H2P55055 460 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 HPCAP84074 193 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 EPS8Q12929 822 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 BNIP2Q12982 314 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 ITGADQ13349 1161 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 STK11Q15831 433 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 TTMPQ5BVD1 217 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 NCMAPQ5T1S8 102 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 SHEQ5VZ18 495 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 SLC2A7Q6PXP3 512 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 C20orf204Q6ZNR8 217 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 Q6ZT83 130 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 GRINAQ7Z429 371 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 MTDHQ86UE4 582 aaKnown RBP15.67■□□□□ 0.1
HDDC3-205ENST00000559898 KIRREL3Q8IZU9 778 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 LRRC75A-AS1Q8N1F1 130 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 C10orf111Q8N326 155 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 CLIP4Q8N3C7 705 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 PIWIL2Q8TC59 973 aaKnown RBP15.67■□□□□ 0.1
HDDC3-205ENST00000559898 KISS1RQ969F8 398 aaPredicted RBP15.67■□□□□ 0.1
HDDC3-205ENST00000559898 PIGTQ969N2 578 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 ZBTB18Q99592 522 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 OR10A4Q9H209 315 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 GP6Q9HCN6 339 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 SDR39U1Q9NRG7 319 aaPredicted RBP15.67■□□□□ 0.1
HDDC3-205ENST00000559898 USH1CQ9Y6N9 552 aa15.67■□□□□ 0.1
HDDC3-205ENST00000559898 ZNF724A8MTY0 619 aa15.66■□□□□ 0.1
HDDC3-205ENST00000559898 CLOCKO15516 846 aa15.66■□□□□ 0.1
HDDC3-205ENST00000559898 BCHEP06276 602 aa15.66■□□□□ 0.1
HDDC3-205ENST00000559898 SOD3P08294 240 aa15.66■□□□□ 0.1
HDDC3-205ENST00000559898 TFPTP0C1Z6 253 aa15.66■□□□□ 0.1
HDDC3-205ENST00000559898 IDO1P14902 403 aa15.66■□□□□ 0.1
HDDC3-205ENST00000559898 PTNP21246 168 aa15.66■□□□□ 0.1
HDDC3-205ENST00000559898 ACAA2P42765 397 aaKnown RBP15.66■□□□□ 0.1
HDDC3-205ENST00000559898 POLR2JP52435 117 aaKnown RBP15.66■□□□□ 0.1
HDDC3-205ENST00000559898 OR2B6P58173 313 aa15.66■□□□□ 0.1
HDDC3-205ENST00000559898 BSPH1Q075Z2 132 aa15.66■□□□□ 0.1
HDDC3-205ENST00000559898 CAPRIN1Q14444 709 aaKnown RBP15.66■□□□□ 0.1
HDDC3-205ENST00000559898 EPGNQ6UW88 154 aa15.66■□□□□ 0.1
HDDC3-205ENST00000559898 TRIML2Q8N7C3 387 aa15.66■□□□□ 0.1
HDDC3-205ENST00000559898 SLC38A5Q8WUX1 472 aa15.66■□□□□ 0.1
HDDC3-205ENST00000559898 PAIP1Q9H074 479 aaKnown RBP15.66■□□□□ 0.1
HDDC3-205ENST00000559898 TPT1P8Q9HAU6 139 aa15.66■□□□□ 0.1
HDDC3-205ENST00000559898 ZIM2Q9NZV7 527 aa15.66■□□□□ 0.1
HDDC3-205ENST00000559898 ZANQ9Y493 2812 aa15.66■□□□□ 0.1
HDDC3-205ENST00000559898 DSPPQ9NZW4 1301 aa15.66■□□□□ 0.1
HDDC3-205ENST00000559898 IGKV3D-15A0A087WSY6 115 aa15.65■□□□□ 0.1
HDDC3-205ENST00000559898 UBDO15205 165 aa15.65■□□□□ 0.1
HDDC3-205ENST00000559898 FRS3O43559 492 aa15.65■□□□□ 0.1
HDDC3-205ENST00000559898 PMS2P2O95744 297 aa15.65■□□□□ 0.1
HDDC3-205ENST00000559898 LY6G6DO95868 133 aa15.65■□□□□ 0.1
HDDC3-205ENST00000559898 IL6P05231 212 aa15.65■□□□□ 0.1
HDDC3-205ENST00000559898 IL7RP16871 459 aa15.65■□□□□ 0.1
HDDC3-205ENST00000559898 ADSLP30566 484 aaPredicted RBP15.65■□□□□ 0.1
HDDC3-205ENST00000559898 CRATP43155 626 aa15.65■□□□□ 0.1
HDDC3-205ENST00000559898 HOXC5Q00444 222 aa15.65■□□□□ 0.1
HDDC3-205ENST00000559898 LTBQ06643 244 aa15.65■□□□□ 0.1
HDDC3-205ENST00000559898 ADAM5Q6NVV9 412 aa15.65■□□□□ 0.1
HDDC3-205ENST00000559898 GALNT5Q7Z7M9 940 aa15.65■□□□□ 0.1
HDDC3-205ENST00000559898 COMTD1Q86VU5 262 aa15.65■□□□□ 0.1
HDDC3-205ENST00000559898 FUNDC1Q8IVP5 155 aa15.65■□□□□ 0.1
HDDC3-205ENST00000559898 MSRB3Q8IXL7 192 aa15.65■□□□□ 0.1
HDDC3-205ENST00000559898 ZNF433Q8N7K0 673 aaPredicted RBP15.65■□□□□ 0.1
HDDC3-205ENST00000559898 GLB1L3Q8NCI6 653 aaPredicted RBP15.65■□□□□ 0.1
HDDC3-205ENST00000559898 OR52E4Q8NGH9 312 aa15.65■□□□□ 0.1
HDDC3-205ENST00000559898 SLC25A43Q8WUT9 341 aaPredicted RBP15.65■□□□□ 0.1
HDDC3-205ENST00000559898 GTF2H4Q92759 462 aa15.65■□□□□ 0.1
HDDC3-205ENST00000559898 MAL2Q969L2 176 aa15.65■□□□□ 0.1
HDDC3-205ENST00000559898 TMEM19Q96HH6 336 aa15.65■□□□□ 0.1
HDDC3-205ENST00000559898 MTHFD2LQ9H903 347 aaPredicted RBP15.65■□□□□ 0.1
HDDC3-205ENST00000559898 SLAMF8Q9P0V8 285 aa15.65■□□□□ 0.1
HDDC3-205ENST00000559898 LAMP3Q9UQV4 416 aa15.65■□□□□ 0.1
HDDC3-205ENST00000559898 LIPT1Q9Y234 373 aa15.65■□□□□ 0.1
HDDC3-205ENST00000559898 PCDHB14Q9Y5E9 798 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms