RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 DNAJA3Q96EY1 480 aa13.17□□□□□ -0.3
RPL28-208ENST00000559463 MED18Q9BUE0 208 aa13.17□□□□□ -0.3
RPL28-208ENST00000559463 KLHL4Q9C0H6 718 aa13.17□□□□□ -0.3
RPL28-208ENST00000559463 BCO1Q9HAY6 547 aa13.17□□□□□ -0.3
RPL28-208ENST00000559463 GP6Q9HCN6 339 aa13.17□□□□□ -0.3
RPL28-208ENST00000559463 C6orf203Q9P0P8 240 aaPredicted RBP13.17□□□□□ -0.3
RPL28-208ENST00000559463 ST6GALNAC2Q9UJ37 374 aa13.17□□□□□ -0.3
RPL28-208ENST00000559463 OSGIN1Q9UJX0 560 aa13.17□□□□□ -0.3
RPL28-208ENST00000559463 GMEB1Q9Y692 573 aa13.17□□□□□ -0.3
RPL28-208ENST00000559463 FLNAP21333 2647 aaKnown RBP13.16□□□□□ -0.3
RPL28-208ENST00000559463 TMED7-TICAM2A0A0A6YYA0 188 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 A0A0G2JND7 137 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 A0A0G2JPF8 293 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 A0A1W2PP18 115 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 TMEM72A0PK05 275 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 DEFB108AA8MXU0 73 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 HNRNPCL2B2RXH8 293 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 HNRNPCL3B7ZW38 293 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 SULT2B1O00204 365 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 HNRNPCL1O60812 293 aaKnown RBP13.16□□□□□ -0.3
RPL28-208ENST00000559463 PMS2P2O95744 297 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 YES1P07947 543 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 THBS1P07996 1170 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 HNRNPCL4P0DMR1 293 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 NCF2P19878 526 aaPredicted RBP13.16□□□□□ -0.3
RPL28-208ENST00000559463 CCNA2P20248 432 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 CRYGSP22914 178 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 ACAA2P42765 397 aaKnown RBP13.16□□□□□ -0.3
RPL28-208ENST00000559463 SLC1A3P43003 542 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 IST1P53990 364 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 TMEM201Q5SNT2 666 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 FBXW10Q5XX13 1052 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 ANKRD34AQ69YU3 496 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 ABLIM2Q6H8Q1 611 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 DLEU7Q6UYE1 221 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 CLIP4Q8N3C7 705 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 ZNF300Q96RE9 604 aaPredicted RBP13.16□□□□□ -0.3
RPL28-208ENST00000559463 SIKE1Q9BRV8 207 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 RSPO3Q9BXY4 272 aaPredicted RBP13.16□□□□□ -0.3
RPL28-208ENST00000559463 PLEKHF2Q9H8W4 249 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 BCL2L10Q9HD36 194 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 KLHL9Q9P2J3 617 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 PLEKHA6Q9Y2H5 1048 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 TMED7Q9Y3B3 224 aa13.16□□□□□ -0.3
RPL28-208ENST00000559463 SPIN1Q9Y657 262 aaPredicted RBP13.16□□□□□ -0.3
RPL28-208ENST00000559463 TMEM247A6NEH6 219 aa13.15□□□□□ -0.3
RPL28-208ENST00000559463 GCM2O75603 506 aaPredicted RBP13.15□□□□□ -0.3
RPL28-208ENST00000559463 THBDP07204 575 aa13.15□□□□□ -0.3
RPL28-208ENST00000559463 ARAFP10398 606 aa13.15□□□□□ -0.3
RPL28-208ENST00000559463 TFPIP10646 304 aa13.15□□□□□ -0.3
RPL28-208ENST00000559463 PRG2P13727 222 aa13.15□□□□□ -0.3
RPL28-208ENST00000559463 EDNRAP25101 427 aa13.15□□□□□ -0.3
RPL28-208ENST00000559463 TACR3P29371 465 aa13.15□□□□□ -0.3
RPL28-208ENST00000559463 HTR3AP46098 478 aa13.15□□□□□ -0.3
RPL28-208ENST00000559463 POLR2HP52434 150 aaKnown RBP13.15□□□□□ -0.3
RPL28-208ENST00000559463 CSNK2A1P68400 391 aaPredicted RBP13.15□□□□□ -0.3
RPL28-208ENST00000559463 RASGEF1BQ0VAM2 473 aa13.15□□□□□ -0.3
RPL28-208ENST00000559463 LARS2Q15031 903 aaKnown RBP13.15□□□□□ -0.3
RPL28-208ENST00000559463 GCNT6Q5T4J0 391 aa13.15□□□□□ -0.3
RPL28-208ENST00000559463 PRAMEF8Q5VWM4 474 aa13.15□□□□□ -0.3
RPL28-208ENST00000559463 PRAMEF7Q5VXH5 474 aa13.15□□□□□ -0.3
RPL28-208ENST00000559463 PAMR1Q6UXH9 720 aa13.15□□□□□ -0.3
RPL28-208ENST00000559463 BEND4Q6ZU67 534 aa13.15□□□□□ -0.3
RPL28-208ENST00000559463 STK32CQ86UX6 486 aa13.15□□□□□ -0.3
RPL28-208ENST00000559463 ZNF440Q8IYI8 595 aa13.15□□□□□ -0.3
RPL28-208ENST00000559463 GABRG1Q8N1C3 465 aa13.15□□□□□ -0.3
RPL28-208ENST00000559463 NFKBIDQ8NI38 313 aa13.15□□□□□ -0.3
RPL28-208ENST00000559463 BBS10Q8TAM1 723 aa13.15□□□□□ -0.3
RPL28-208ENST00000559463 NINJ1Q92982 152 aa13.15□□□□□ -0.3
RPL28-208ENST00000559463 ZC3HAV1LQ96H79 300 aaKnown RBP13.15□□□□□ -0.3
RPL28-208ENST00000559463 CPPED1Q9BRF8 314 aaPredicted RBP13.15□□□□□ -0.3
RPL28-208ENST00000559463 ADAM19Q9H013 955 aa13.15□□□□□ -0.3
RPL28-208ENST00000559463 RABEP2Q9H5N1 569 aa13.15□□□□□ -0.3
RPL28-208ENST00000559463 HDGFL3Q9Y3E1 203 aa13.15□□□□□ -0.3
RPL28-208ENST00000559463 ACANP16112 2415 aa13.15□□□□□ -0.3
RPL28-208ENST00000559463 ZC3H12DA2A288 527 aaKnown RBP13.14□□□□□ -0.31
RPL28-208ENST00000559463 ZNF814B7Z6K7 855 aa13.14□□□□□ -0.31
RPL28-208ENST00000559463 CASKO14936 926 aa13.14□□□□□ -0.31
RPL28-208ENST00000559463 ZNF208O43345 1280 aa13.14□□□□□ -0.31
RPL28-208ENST00000559463 PGM3O95394 542 aa13.14□□□□□ -0.31
RPL28-208ENST00000559463 IMPDH2P12268 514 aa13.14□□□□□ -0.31
RPL28-208ENST00000559463 PPIBP23284 216 aaKnown RBP13.14□□□□□ -0.31
RPL28-208ENST00000559463 LOXP28300 417 aaPredicted RBP13.14□□□□□ -0.31
RPL28-208ENST00000559463 CLK1P49759 484 aaKnown RBP13.14□□□□□ -0.31
RPL28-208ENST00000559463 CGB2Q6NT52 195 aa13.14□□□□□ -0.31
RPL28-208ENST00000559463 SERPINA11Q86U17 422 aa13.14□□□□□ -0.31
RPL28-208ENST00000559463 MTDHQ86UE4 582 aaKnown RBP13.14□□□□□ -0.31
RPL28-208ENST00000559463 RETREG3Q86VR2 466 aa13.14□□□□□ -0.31
RPL28-208ENST00000559463 CXorf67Q86X51 503 aaPredicted RBP13.14□□□□□ -0.31
RPL28-208ENST00000559463 ZNF775Q96BV0 537 aaPredicted RBP13.14□□□□□ -0.31
RPL28-208ENST00000559463 TACO1Q9BSH4 297 aaKnown RBP13.14□□□□□ -0.31
RPL28-208ENST00000559463 SPATA9Q9BWV2 254 aa13.14□□□□□ -0.31
RPL28-208ENST00000559463 TMEM120AQ9BXJ8 343 aa13.14□□□□□ -0.31
RPL28-208ENST00000559463 CCM2LQ9NUG4 571 aaPredicted RBP13.14□□□□□ -0.31
RPL28-208ENST00000559463 ZNF226Q9NYT6 803 aa13.14□□□□□ -0.31
RPL28-208ENST00000559463 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.14□□□□□ -0.31
RPL28-208ENST00000559463 TRIM33Q9UPN9 1127 aa13.14□□□□□ -0.31
RPL28-208ENST00000559463 PLCE1Q9P212 2302 aa13.14□□□□□ -0.31
RPL28-208ENST00000559463 HEATR1Q9H583 2144 aaKnown RBP13.13□□□□□ -0.31
RPL28-208ENST00000559463 IGKV3D-15A0A087WSY6 115 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms