RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 GALNT9Q9HCQ5 603 aa15.06■□□□□ 0
TPM1-219ENST00000559397 SACM1LQ9NTJ5 587 aa15.06■□□□□ 0
TPM1-219ENST00000559397 BOD1L1Q8NFC6 3051 aa15.05■□□□□ 0
TPM1-219ENST00000559397 KLF4O43474 513 aa15.05■□□□□ -0
TPM1-219ENST00000559397 CSTAP01040 98 aa15.05■□□□□ -0
TPM1-219ENST00000559397 P04436 131 aa15.05■□□□□ -0
TPM1-219ENST00000559397 SP1P08047 785 aa15.05■□□□□ -0
TPM1-219ENST00000559397 ATP6V1B1P15313 513 aa15.05■□□□□ -0
TPM1-219ENST00000559397 HPGDP15428 266 aa15.05■□□□□ -0
TPM1-219ENST00000559397 GSTM3P21266 225 aa15.05■□□□□ -0
TPM1-219ENST00000559397 TSPAN31Q12999 210 aa15.05■□□□□ -0
TPM1-219ENST00000559397 CD226Q15762 336 aa15.05■□□□□ -0
TPM1-219ENST00000559397 MARCH3Q86UD3 253 aa15.05■□□□□ -0
TPM1-219ENST00000559397 ZNF440Q8IYI8 595 aa15.05■□□□□ -0
TPM1-219ENST00000559397 ENTHD1Q8IYW4 607 aa15.05■□□□□ -0
TPM1-219ENST00000559397 EXD3Q8N9H8 876 aa15.05■□□□□ -0
TPM1-219ENST00000559397 CNIH3Q8TBE1 160 aa15.05■□□□□ -0
TPM1-219ENST00000559397 PIGXQ8TBF5 258 aa15.05■□□□□ -0
TPM1-219ENST00000559397 UBE2FQ969M7 185 aa15.05■□□□□ -0
TPM1-219ENST00000559397 TBL1XR1Q9BZK7 514 aa15.05■□□□□ -0
TPM1-219ENST00000559397 TMEM27Q9HBJ8 222 aa15.05■□□□□ -0
TPM1-219ENST00000559397 DEPPQ9NTK1 212 aa15.05■□□□□ -0
TPM1-219ENST00000559397 KLRF1Q9NZS2 232 aa15.05■□□□□ -0
TPM1-219ENST00000559397 A0A0B4J2E0 115 aa15.04■□□□□ -0
TPM1-219ENST00000559397 A0A1B0GX12 115 aa15.04■□□□□ -0
TPM1-219ENST00000559397 C17orf51A8MQB3 221 aa15.04■□□□□ -0
TPM1-219ENST00000559397 SLC1A7O00341 560 aa15.04■□□□□ -0
TPM1-219ENST00000559397 SCO2O43819 266 aa15.04■□□□□ -0
TPM1-219ENST00000559397 NME2P1O60361 137 aa15.04■□□□□ -0
TPM1-219ENST00000559397 WBP4O75554 376 aaKnown RBP15.04■□□□□ -0
TPM1-219ENST00000559397 NTN1O95631 604 aa15.04■□□□□ -0
TPM1-219ENST00000559397 ANGPTL1O95841 491 aa15.04■□□□□ -0
TPM1-219ENST00000559397 CD46P15529 392 aa15.04■□□□□ -0
TPM1-219ENST00000559397 CNR1P21554 472 aa15.04■□□□□ -0
TPM1-219ENST00000559397 NME2P22392 152 aa15.04■□□□□ -0
TPM1-219ENST00000559397 NR1H2P55055 460 aa15.04■□□□□ -0
TPM1-219ENST00000559397 GABARAPL2P60520 117 aa15.04■□□□□ -0
TPM1-219ENST00000559397 TEKQ02763 1124 aa15.04■□□□□ -0
TPM1-219ENST00000559397 ZNF766Q5HY98 468 aa15.04■□□□□ -0
TPM1-219ENST00000559397 SLC30A6Q6NXT4 461 aa15.04■□□□□ -0
TPM1-219ENST00000559397 WDR88Q6ZMY6 472 aa15.04■□□□□ -0
TPM1-219ENST00000559397 Q6ZS92 163 aa15.04■□□□□ -0
TPM1-219ENST00000559397 RNF113BQ8IZP6 322 aaKnown RBP15.04■□□□□ -0
TPM1-219ENST00000559397 DEPDC4Q8N2C3 294 aa15.04■□□□□ -0
TPM1-219ENST00000559397 RHOXF1Q8NHV9 184 aa15.04■□□□□ -0
TPM1-219ENST00000559397 C9orf43Q8TAL5 461 aaPredicted RBP15.04■□□□□ -0
TPM1-219ENST00000559397 TMEM255BQ8WV15 326 aa15.04■□□□□ -0
TPM1-219ENST00000559397 FRMD6Q96NE9 622 aa15.04■□□□□ -0
TPM1-219ENST00000559397 EXOSC3Q9NQT5 275 aaKnown RBP15.04■□□□□ -0
TPM1-219ENST00000559397 RNF6Q9Y252 685 aa15.04■□□□□ -0
TPM1-219ENST00000559397 PCDHGB6Q9Y5F9 930 aa15.04■□□□□ -0
TPM1-219ENST00000559397 NBEAQ8NFP9 2946 aa15.04■□□□□ -0
TPM1-219ENST00000559397 TRAV17A0A0B4J275 112 aa15.03■□□□□ -0
TPM1-219ENST00000559397 A0A0G2JMM0 328 aa15.03■□□□□ -0
TPM1-219ENST00000559397 A0A1B0GWA3 101 aa15.03■□□□□ -0
TPM1-219ENST00000559397 A0A1W2PPB8 328 aa15.03■□□□□ -0
TPM1-219ENST00000559397 A0A1W2PRS3 328 aa15.03■□□□□ -0
TPM1-219ENST00000559397 C2orf72A6NCS6 295 aa15.03■□□□□ -0
TPM1-219ENST00000559397 KIR3DP1A8MWS1 328 aa15.03■□□□□ -0
TPM1-219ENST00000559397 B4DXG7 233 aa15.03■□□□□ -0
TPM1-219ENST00000559397 G3V3Y1 287 aa15.03■□□□□ -0
TPM1-219ENST00000559397 GABRB1P18505 474 aa15.03■□□□□ -0
TPM1-219ENST00000559397 FPR3P25089 353 aa15.03■□□□□ -0
TPM1-219ENST00000559397 ALDH3B2P48448 385 aa15.03■□□□□ -0
TPM1-219ENST00000559397 SLX4IPQ5VYV7 408 aa15.03■□□□□ -0
TPM1-219ENST00000559397 ASB18Q6ZVZ8 466 aa15.03■□□□□ -0
TPM1-219ENST00000559397 RRM2BQ7LG56 351 aa15.03■□□□□ -0
TPM1-219ENST00000559397 SULF2Q8IWU5 870 aa15.03■□□□□ -0
TPM1-219ENST00000559397 GATSQ8NAP1 163 aa15.03■□□□□ -0
TPM1-219ENST00000559397 APH1BQ8WW43 257 aa15.03■□□□□ -0
TPM1-219ENST00000559397 C5orf34Q96MH7 638 aa15.03■□□□□ -0
TPM1-219ENST00000559397 KLHL1Q9NR64 748 aa15.03■□□□□ -0
TPM1-219ENST00000559397 ZNF226Q9NYT6 803 aa15.03■□□□□ -0
TPM1-219ENST00000559397 BLOC1S6Q9UL45 172 aa15.03■□□□□ -0
TPM1-219ENST00000559397 WIF1Q9Y5W5 379 aa15.03■□□□□ -0
TPM1-219ENST00000559397 PINLYPA6NC86 204 aa15.03■□□□□ -0
TPM1-219ENST00000559397 NDUFB5O43674 189 aa15.03■□□□□ -0
TPM1-219ENST00000559397 CHP2O43745 196 aa15.03■□□□□ -0
TPM1-219ENST00000559397 TRIM3O75382 744 aaPredicted RBP15.03■□□□□ -0
TPM1-219ENST00000559397 SNX4O95219 450 aa15.03■□□□□ -0
TPM1-219ENST00000559397 IGFBP1P08833 259 aaPredicted RBP15.03■□□□□ -0
TPM1-219ENST00000559397 DNASE1L1P49184 302 aa15.03■□□□□ -0
TPM1-219ENST00000559397 SKP2Q13309 424 aa15.03■□□□□ -0
TPM1-219ENST00000559397 INPP5JQ15735 1006 aaPredicted RBP15.03■□□□□ -0
TPM1-219ENST00000559397 NDUFAF6Q330K2 333 aa15.03■□□□□ -0
TPM1-219ENST00000559397 C12orf73Q69YU5 71 aa15.03■□□□□ -0
TPM1-219ENST00000559397 ZNF773Q6PK81 442 aa15.03■□□□□ -0
TPM1-219ENST00000559397 PCSK4Q6UW60 755 aa15.03■□□□□ -0
TPM1-219ENST00000559397 RASSF6Q6ZTQ3 369 aa15.03■□□□□ -0
TPM1-219ENST00000559397 GALNTL5Q7Z4T8 443 aa15.03■□□□□ -0
TPM1-219ENST00000559397 MISPQ8IVT2 679 aa15.03■□□□□ -0
TPM1-219ENST00000559397 NRMQ8IXM6 262 aa15.03■□□□□ -0
TPM1-219ENST00000559397 FAM81AQ8TBF8 368 aa15.03■□□□□ -0
TPM1-219ENST00000559397 PHOSPHO1Q8TCT1 267 aa15.03■□□□□ -0
TPM1-219ENST00000559397 HS6ST2Q96MM7 605 aa15.03■□□□□ -0
TPM1-219ENST00000559397 ZNF426Q9BUY5 554 aa15.03■□□□□ -0
TPM1-219ENST00000559397 ZNF71Q9NQZ8 489 aaPredicted RBP15.03■□□□□ -0
TPM1-219ENST00000559397 AASSQ9UDR5 926 aa15.03■□□□□ -0
TPM1-219ENST00000559397 KLF13Q9Y2Y9 288 aaPredicted RBP15.03■□□□□ -0
TPM1-219ENST00000559397 HRH3Q9Y5N1 445 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms