RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 ARMC8Q8IUR7 673 aa16.73■□□□□ 0.27
CASC4-209ENST00000559222 SLC15A3Q8IY34 581 aa16.73■□□□□ 0.27
CASC4-209ENST00000559222 ACBD4Q8NC06 268 aa16.73■□□□□ 0.27
CASC4-209ENST00000559222 ABHD3Q8WU67 409 aa16.73■□□□□ 0.27
CASC4-209ENST00000559222 C3orf49Q96BT1 292 aa16.73■□□□□ 0.27
CASC4-209ENST00000559222 ECSITQ9BQ95 431 aa16.73■□□□□ 0.27
CASC4-209ENST00000559222 CACYBPQ9HB71 228 aaKnown RBP16.73■□□□□ 0.27
CASC4-209ENST00000559222 ZNF629Q9UEG4 869 aaPredicted RBP16.73■□□□□ 0.27
CASC4-209ENST00000559222 FAM220BPB1ANY3 271 aa16.72■□□□□ 0.27
CASC4-209ENST00000559222 DVL2O14641 736 aa16.72■□□□□ 0.27
CASC4-209ENST00000559222 TFPIP10646 304 aa16.72■□□□□ 0.27
CASC4-209ENST00000559222 IGFBP2P18065 325 aa16.72■□□□□ 0.27
CASC4-209ENST00000559222 SLC7A1P30825 629 aa16.72■□□□□ 0.27
CASC4-209ENST00000559222 NPTX1Q15818 432 aa16.72■□□□□ 0.27
CASC4-209ENST00000559222 BTLAQ7Z6A9 289 aa16.72■□□□□ 0.27
CASC4-209ENST00000559222 LUZP2Q86TE4 346 aa16.72■□□□□ 0.27
CASC4-209ENST00000559222 RBM45Q8IUH3 476 aaKnown RBP16.72■□□□□ 0.27
CASC4-209ENST00000559222 CNEP1R1Q8N9A8 125 aa16.72■□□□□ 0.27
CASC4-209ENST00000559222 STARD4Q96DR4 205 aa16.72■□□□□ 0.27
CASC4-209ENST00000559222 REXO5Q96IC2 774 aaKnown RBP16.72■□□□□ 0.27
CASC4-209ENST00000559222 ZNF607Q96SK3 696 aa16.72■□□□□ 0.27
CASC4-209ENST00000559222 SFXN3Q9BWM7 321 aa16.72■□□□□ 0.27
CASC4-209ENST00000559222 JKAMPQ9P055 326 aa16.72■□□□□ 0.27
CASC4-209ENST00000559222 STOML1Q9UBI4 398 aa16.72■□□□□ 0.27
CASC4-209ENST00000559222 ADAM21Q9UKJ8 722 aa16.72■□□□□ 0.27
CASC4-209ENST00000559222 PACSIN3Q9UKS6 424 aa16.72■□□□□ 0.27
CASC4-209ENST00000559222 GJE1A6NN92 205 aa16.71■□□□□ 0.27
CASC4-209ENST00000559222 TMEM229AB2RXF0 380 aa16.71■□□□□ 0.27
CASC4-209ENST00000559222 ZNF814B7Z6K7 855 aa16.71■□□□□ 0.27
CASC4-209ENST00000559222 SMAD9O15198 467 aaKnown RBP16.71■□□□□ 0.27
CASC4-209ENST00000559222 SYNGR4O95473 234 aa16.71■□□□□ 0.27
CASC4-209ENST00000559222 IL18BPO95998 194 aa16.71■□□□□ 0.27
CASC4-209ENST00000559222 IMPDH2P12268 514 aa16.71■□□□□ 0.27
CASC4-209ENST00000559222 TNFRSF1BP20333 461 aa16.71■□□□□ 0.27
CASC4-209ENST00000559222 PTNP21246 168 aa16.71■□□□□ 0.27
CASC4-209ENST00000559222 PRDX6P30041 224 aa16.71■□□□□ 0.27
CASC4-209ENST00000559222 DIO1P49895 249 aa16.71■□□□□ 0.27
CASC4-209ENST00000559222 ASCL1P50553 236 aa16.71■□□□□ 0.27
CASC4-209ENST00000559222 MYBPHQ13203 477 aa16.71■□□□□ 0.27
CASC4-209ENST00000559222 WBP2NLQ6ICG8 309 aa16.71■□□□□ 0.27
CASC4-209ENST00000559222 TSPYL5Q86VY4 417 aaPredicted RBP16.71■□□□□ 0.27
CASC4-209ENST00000559222 RNF128Q8TEB7 428 aa16.71■□□□□ 0.27
CASC4-209ENST00000559222 ZFP3Q96NJ6 502 aa16.71■□□□□ 0.27
CASC4-209ENST00000559222 ARHGDIGQ99819 225 aa16.71■□□□□ 0.27
CASC4-209ENST00000559222 SH3GL1Q99961 368 aa16.71■□□□□ 0.27
CASC4-209ENST00000559222 SPATA5L1Q9BVQ7 753 aa16.71■□□□□ 0.27
CASC4-209ENST00000559222 PRRG4Q9BZD6 226 aa16.71■□□□□ 0.27
CASC4-209ENST00000559222 OPN3Q9H1Y3 402 aaPredicted RBP16.71■□□□□ 0.27
CASC4-209ENST00000559222 SERINC1Q9NRX5 453 aa16.71■□□□□ 0.27
CASC4-209ENST00000559222 ING1Q9UK53 422 aaPredicted RBP16.71■□□□□ 0.27
CASC4-209ENST00000559222 MCTS1Q9ULC4 181 aaKnown RBP16.71■□□□□ 0.27
CASC4-209ENST00000559222 ADGRG4Q8IZF6 3080 aa16.7■□□□□ 0.26
CASC4-209ENST00000559222 RAMP1O60894 148 aa16.7■□□□□ 0.26
CASC4-209ENST00000559222 FAM107AO95990 144 aa16.7■□□□□ 0.26
CASC4-209ENST00000559222 FESP07332 822 aa16.7■□□□□ 0.26
CASC4-209ENST00000559222 PRF1P14222 555 aa16.7■□□□□ 0.26
CASC4-209ENST00000559222 OPRM1P35372 400 aa16.7■□□□□ 0.26
CASC4-209ENST00000559222 KCNJ5P48544 419 aa16.7■□□□□ 0.26
CASC4-209ENST00000559222 RGS8P57771 180 aaPredicted RBP16.7■□□□□ 0.26
CASC4-209ENST00000559222 LIPEQ05469 1076 aa16.7■□□□□ 0.26
CASC4-209ENST00000559222 NRF1Q16656 503 aa16.7■□□□□ 0.26
CASC4-209ENST00000559222 PDSS1Q5T2R2 415 aa16.7■□□□□ 0.26
CASC4-209ENST00000559222 HACD2Q6Y1H2 254 aa16.7■□□□□ 0.26
CASC4-209ENST00000559222 MEX3BQ6ZN04 569 aaKnown RBP16.7■□□□□ 0.26
CASC4-209ENST00000559222 TMPPEQ6ZT21 453 aa16.7■□□□□ 0.26
CASC4-209ENST00000559222 CCDC80Q76M96 950 aa16.7■□□□□ 0.26
CASC4-209ENST00000559222 ATG4DQ86TL0 474 aaPredicted RBP16.7■□□□□ 0.26
CASC4-209ENST00000559222 MICU2Q8IYU8 434 aa16.7■□□□□ 0.26
CASC4-209ENST00000559222 VANGL1Q8TAA9 524 aaPredicted RBP16.7■□□□□ 0.26
CASC4-209ENST00000559222 CPNE4Q96A23 557 aaPredicted RBP16.7■□□□□ 0.26
CASC4-209ENST00000559222 ENKD1Q9H0I2 346 aa16.7■□□□□ 0.26
CASC4-209ENST00000559222 EFCAB1Q9HAE3 211 aa16.7■□□□□ 0.26
CASC4-209ENST00000559222 CRYBG3Q68DQ2 2970 aa16.7■□□□□ 0.26
CASC4-209ENST00000559222 UNC79Q9P2D8 2635 aa16.69■□□□□ 0.26
CASC4-209ENST00000559222 A0A1B0GWA3 101 aa16.69■□□□□ 0.26
CASC4-209ENST00000559222 PRORSD1PA6NEY8 169 aa16.69■□□□□ 0.26
CASC4-209ENST00000559222 SS18L1O75177 396 aaPredicted RBP16.69■□□□□ 0.26
CASC4-209ENST00000559222 SERPINB7O75635 380 aa16.69■□□□□ 0.26
CASC4-209ENST00000559222 SMNDC1O75940 238 aaKnown RBP eCLIP16.69■□□□□ 0.26
CASC4-209ENST00000559222 LGI1O95970 557 aa16.69■□□□□ 0.26
CASC4-209ENST00000559222 CGAP01215 116 aa16.69■□□□□ 0.26
CASC4-209ENST00000559222 FCGR2AP12318 317 aa16.69■□□□□ 0.26
CASC4-209ENST00000559222 UQCRBP14927 111 aa16.69■□□□□ 0.26
CASC4-209ENST00000559222 HTR3AP46098 478 aa16.69■□□□□ 0.26
CASC4-209ENST00000559222 GSK3BP49841 420 aa16.69■□□□□ 0.26
CASC4-209ENST00000559222 RAC3P60763 192 aa16.69■□□□□ 0.26
CASC4-209ENST00000559222 PSME3P61289 254 aa16.69■□□□□ 0.26
CASC4-209ENST00000559222 ZSWIM7Q19AV6 140 aa16.69■□□□□ 0.26
CASC4-209ENST00000559222 OR2A2Q6IF42 318 aa16.69■□□□□ 0.26
CASC4-209ENST00000559222 FCRLAQ7L513 359 aa16.69■□□□□ 0.26
CASC4-209ENST00000559222 PATL1Q86TB9 770 aaKnown RBP16.69■□□□□ 0.26
CASC4-209ENST00000559222 SLC30A8Q8IWU4 369 aa16.69■□□□□ 0.26
CASC4-209ENST00000559222 FITM2Q8N6M3 262 aa16.69■□□□□ 0.26
CASC4-209ENST00000559222 OR2T12Q8NG77 320 aa16.69■□□□□ 0.26
CASC4-209ENST00000559222 OR6T1Q8NGN1 323 aa16.69■□□□□ 0.26
CASC4-209ENST00000559222 SLC25A43Q8WUT9 341 aaPredicted RBP16.69■□□□□ 0.26
CASC4-209ENST00000559222 SLC35B4Q969S0 331 aa16.69■□□□□ 0.26
CASC4-209ENST00000559222 MARVELD3Q96A59 401 aa16.69■□□□□ 0.26
CASC4-209ENST00000559222 CMTM5Q96DZ9 223 aa16.69■□□□□ 0.26
CASC4-209ENST00000559222 LRRC37BQ96QE4 947 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms