RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 POMZP3Q6PJE2 187 aa16.36■□□□□ 0.21
CLPX-203ENST00000558958 ASB18Q6ZVZ8 466 aa16.36■□□□□ 0.21
CLPX-203ENST00000558958 RNF113BQ8IZP6 322 aaKnown RBP16.36■□□□□ 0.21
CLPX-203ENST00000558958 FAM98AQ8NCA5 519 aaKnown RBP16.36■□□□□ 0.21
CLPX-203ENST00000558958 FAM83FQ8NEG4 500 aaPredicted RBP16.36■□□□□ 0.21
CLPX-203ENST00000558958 OR9Q2Q8NGE9 314 aa16.36■□□□□ 0.21
CLPX-203ENST00000558958 OR2B2Q9GZK3 357 aa16.36■□□□□ 0.21
CLPX-203ENST00000558958 IGKV1D-42A0A075B6H8 117 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 FAM166BA8MTA8 275 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 EI24O14681 340 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 EFNA2O43921 213 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 OR10H3O60404 316 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 RASAL1O95294 804 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 ZNF26P17031 533 aaPredicted RBP16.35■□□□□ 0.21
CLPX-203ENST00000558958 PTNP21246 168 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 TCEA1P23193 301 aaKnown RBP16.35■□□□□ 0.21
CLPX-203ENST00000558958 PPIAP62937 165 aaKnown RBP16.35■□□□□ 0.21
CLPX-203ENST00000558958 PPP4R4Q6NUP7 873 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 FAHD1Q6P587 224 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 RRM2BQ7LG56 351 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 NRMQ8IXM6 262 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 TMEM251Q8N6I4 163 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 OR5M1Q8NGP8 315 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 FEVQ99581 238 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 ARHGAP9Q9BRR9 750 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 TMEM43Q9BTV4 400 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 OSBPL10Q9BXB5 764 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 SLC19A3Q9BZV2 496 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 ADNPQ9H2P0 1102 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 SMURF2Q9HAU4 748 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 MEPEQ9NQ76 525 aaPredicted RBP16.35■□□□□ 0.21
CLPX-203ENST00000558958 B3GNT3Q9Y2A9 372 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 RPH3AQ9Y2J0 694 aaPredicted RBP16.35■□□□□ 0.21
CLPX-203ENST00000558958 MED31Q9Y3C7 131 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 TMEM72A0PK05 275 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 SUSD5O60279 629 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 PIP5K1CO60331 668 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 TRAPPC6AO75865 159 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 HPNP05981 417 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 ZNF17P17021 662 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 CCNA2P20248 432 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 CBLP22681 906 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 MAP2K6P52564 334 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 PPP2R2BQ00005 443 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 EGR4Q05215 589 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 DAG1Q14118 895 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 ANKRD34AQ69YU3 496 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 PGBD2Q6P3X8 592 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 PRICKLE2Q7Z3G6 844 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 ZER1Q7Z7L7 766 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 YRDCQ86U90 279 aaKnown RBP16.35■□□□□ 0.21
CLPX-203ENST00000558958 SLC22A16Q86VW1 577 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 P3H2Q8IVL5 708 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 AQP11Q8NBQ7 271 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 OR14L1PQ8NHC6 308 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 PFN4Q8NHR9 129 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 C9orf43Q8TAL5 461 aaPredicted RBP16.35■□□□□ 0.21
CLPX-203ENST00000558958 PIGXQ8TBF5 258 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 UBL7Q96S82 380 aaPredicted RBP16.35■□□□□ 0.21
CLPX-203ENST00000558958 RBM4BQ9BQ04 359 aaKnown RBP16.35■□□□□ 0.21
CLPX-203ENST00000558958 RBM4Q9BWF3 364 aaKnown RBP16.35■□□□□ 0.21
CLPX-203ENST00000558958 MFRPQ9BY79 579 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 KLHL4Q9C0H6 718 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 C8orf4Q9NR00 106 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 QPCTLQ9NXS2 382 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 CHRNA9Q9UGM1 479 aa16.35■□□□□ 0.21
CLPX-203ENST00000558958 TPRP12270 2363 aaKnown RBP16.34■□□□□ 0.21
CLPX-203ENST00000558958 KPNA4O00629 521 aaPredicted RBP16.34■□□□□ 0.21
CLPX-203ENST00000558958 GASTP01350 101 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 ALPLP05186 524 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 ANXA8P13928 327 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 IL11P20809 199 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 IFNGR2P38484 337 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 VHLP40337 213 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 MAGEA5P43359 124 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 OMPP47874 163 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 DAPP51397 102 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 ALDH3A2P51648 485 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 CTBP2P56545 445 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 B3GALT5-AS1P59052 145 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 FOXK2Q01167 660 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 PMP22Q01453 160 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 PRKCDQ05655 676 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 RNFT1Q5M7Z0 435 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 RAET1LQ5VY80 246 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 C1orf94Q6P1W5 598 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 GALNT4Q8N4A0 578 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 PACRGLQ8N7B6 248 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 ATG16L2Q8NAA4 619 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 PIGQQ9BRB3 760 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 VCX3BQ9H321 246 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 SERINC1Q9NRX5 453 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 C20orf141Q9NUB4 165 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 USE1Q9NZ43 259 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 MGAT4BQ9UQ53 548 aa16.34■□□□□ 0.21
CLPX-203ENST00000558958 NCKAP5O14513 1909 aa16.33■□□□□ 0.21
CLPX-203ENST00000558958 BOD1L1Q8NFC6 3051 aa16.33■□□□□ 0.21
CLPX-203ENST00000558958 OR2M5A3KFT3 312 aa16.33■□□□□ 0.2
CLPX-203ENST00000558958 A8MVM7 634 aa16.33■□□□□ 0.2
CLPX-203ENST00000558958 ACOT7O00154 380 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms