RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 CLIC1O00299 241 aa11.11□□□□□ -0.63
SMAD3-208ENST00000558827 ETV2O00321 342 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-208ENST00000558827 LYZL6O75951 148 aa11.11□□□□□ -0.63
SMAD3-208ENST00000558827 DBIP07108 87 aaKnown RBP11.11□□□□□ -0.63
SMAD3-208ENST00000558827 TFPTP0C1Z6 253 aa11.11□□□□□ -0.63
SMAD3-208ENST00000558827 PRG2P13727 222 aa11.11□□□□□ -0.63
SMAD3-208ENST00000558827 CD99P14209 185 aa11.11□□□□□ -0.63
SMAD3-208ENST00000558827 IL32P24001 234 aa11.11□□□□□ -0.63
SMAD3-208ENST00000558827 LOXP28300 417 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-208ENST00000558827 APOBEC1P41238 236 aaKnown RBP11.11□□□□□ -0.63
SMAD3-208ENST00000558827 PPP2R2AP63151 447 aa11.11□□□□□ -0.63
SMAD3-208ENST00000558827 FOXD4Q12950 439 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-208ENST00000558827 PAGE3Q5JUK9 113 aa11.11□□□□□ -0.63
SMAD3-208ENST00000558827 GRINAQ7Z429 371 aa11.11□□□□□ -0.63
SMAD3-208ENST00000558827 TGIF2LYQ8IUE0 185 aa11.11□□□□□ -0.63
SMAD3-208ENST00000558827 ZNF100Q8IYN0 542 aa11.11□□□□□ -0.63
SMAD3-208ENST00000558827 WFDC11Q8NEX6 87 aa11.11□□□□□ -0.63
SMAD3-208ENST00000558827 PLPPR2Q96GM1 343 aa11.11□□□□□ -0.63
SMAD3-208ENST00000558827 KLHL9Q9P2J3 617 aa11.11□□□□□ -0.63
SMAD3-208ENST00000558827 P2RX2Q9UBL9 471 aa11.11□□□□□ -0.63
SMAD3-208ENST00000558827 CHRNA9Q9UGM1 479 aa11.11□□□□□ -0.63
SMAD3-208ENST00000558827 DCTN4Q9UJW0 460 aa11.11□□□□□ -0.63
SMAD3-208ENST00000558827 EDARQ9UNE0 448 aa11.11□□□□□ -0.63
SMAD3-208ENST00000558827 CFAP73A6NFT4 308 aa11.1□□□□□ -0.63
SMAD3-208ENST00000558827 CYTIPO60759 359 aa11.1□□□□□ -0.63
SMAD3-208ENST00000558827 GCM2O75603 506 aaPredicted RBP11.1□□□□□ -0.63
SMAD3-208ENST00000558827 SASH3O75995 380 aa11.1□□□□□ -0.63
SMAD3-208ENST00000558827 GUSBP08236 651 aa11.1□□□□□ -0.63
SMAD3-208ENST00000558827 ZCCHC18P0CG32 403 aa11.1□□□□□ -0.63
SMAD3-208ENST00000558827 IMPDH2P12268 514 aa11.1□□□□□ -0.63
SMAD3-208ENST00000558827 NCF2P19878 526 aaPredicted RBP11.1□□□□□ -0.63
SMAD3-208ENST00000558827 RPS4Y1P22090 263 aaKnown RBP11.1□□□□□ -0.63
SMAD3-208ENST00000558827 NTF4P34130 210 aa11.1□□□□□ -0.63
SMAD3-208ENST00000558827 ADAM8P78325 824 aa11.1□□□□□ -0.63
SMAD3-208ENST00000558827 LRRC74AQ0VAA2 488 aa11.1□□□□□ -0.63
SMAD3-208ENST00000558827 EPS8Q12929 822 aa11.1□□□□□ -0.63
SMAD3-208ENST00000558827 GNA13Q14344 377 aa11.1□□□□□ -0.63
SMAD3-208ENST00000558827 STK11Q15831 433 aa11.1□□□□□ -0.63
SMAD3-208ENST00000558827 SFRP5Q5T4F7 317 aa11.1□□□□□ -0.63
SMAD3-208ENST00000558827 MSRB3Q8IXL7 192 aa11.1□□□□□ -0.63
SMAD3-208ENST00000558827 GABRG1Q8N1C3 465 aa11.1□□□□□ -0.63
SMAD3-208ENST00000558827 C10orf111Q8N326 155 aa11.1□□□□□ -0.63
SMAD3-208ENST00000558827 SLC43A2Q8N370 569 aa11.1□□□□□ -0.63
SMAD3-208ENST00000558827 CKAP2Q8WWK9 683 aa11.1□□□□□ -0.63
SMAD3-208ENST00000558827 SPDL1Q96EA4 605 aa11.1□□□□□ -0.63
SMAD3-208ENST00000558827 CCDC28BQ9BUN5 200 aa11.1□□□□□ -0.63
SMAD3-208ENST00000558827 PRR14Q9BWN1 585 aa11.1□□□□□ -0.63
SMAD3-208ENST00000558827 CXXC4Q9H2H0 198 aa11.1□□□□□ -0.63
SMAD3-208ENST00000558827 GSX1Q9H4S2 264 aaPredicted RBP11.1□□□□□ -0.63
SMAD3-208ENST00000558827 EXOSC3Q9NQT5 275 aaKnown RBP11.1□□□□□ -0.63
SMAD3-208ENST00000558827 SLC25A37Q9NYZ2 338 aa11.1□□□□□ -0.63
SMAD3-208ENST00000558827 ZNF443Q9Y2A4 671 aaPredicted RBP11.1□□□□□ -0.63
SMAD3-208ENST00000558827 GPR52Q9Y2T5 361 aa11.1□□□□□ -0.63
SMAD3-208ENST00000558827 A0A1W2PR80 420 aa11.09□□□□□ -0.63
SMAD3-208ENST00000558827 HMGB1P1B2RPK0 211 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-208ENST00000558827 CLOCKO15516 846 aa11.09□□□□□ -0.63
SMAD3-208ENST00000558827 TGDSO95455 350 aa11.09□□□□□ -0.63
SMAD3-208ENST00000558827 H2AFXP16104 143 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-208ENST00000558827 FPR1P21462 350 aa11.09□□□□□ -0.63
SMAD3-208ENST00000558827 ACAA2P42765 397 aaKnown RBP11.09□□□□□ -0.63
SMAD3-208ENST00000558827 POLR2HP52434 150 aaKnown RBP11.09□□□□□ -0.63
SMAD3-208ENST00000558827 CRISP3P54108 245 aa11.09□□□□□ -0.63
SMAD3-208ENST00000558827 FOXG1P55316 489 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-208ENST00000558827 CSNK2A1P68400 391 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-208ENST00000558827 RGNQ15493 299 aa11.09□□□□□ -0.63
SMAD3-208ENST00000558827 TAB1Q15750 504 aa11.09□□□□□ -0.63
SMAD3-208ENST00000558827 ACKR1Q16570 336 aa11.09□□□□□ -0.63
SMAD3-208ENST00000558827 BEX5Q5H9J7 111 aa11.09□□□□□ -0.63
SMAD3-208ENST00000558827 C9orf135Q5VTT2 229 aa11.09□□□□□ -0.63
SMAD3-208ENST00000558827 BLOC1S3Q6QNY0 202 aa11.09□□□□□ -0.63
SMAD3-208ENST00000558827 BHLHA15Q7RTS1 189 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-208ENST00000558827 GALNT5Q7Z7M9 940 aa11.09□□□□□ -0.63
SMAD3-208ENST00000558827 SERPINA11Q86U17 422 aa11.09□□□□□ -0.63
SMAD3-208ENST00000558827 MTDHQ86UE4 582 aaKnown RBP11.09□□□□□ -0.63
SMAD3-208ENST00000558827 UBE2J2Q8N2K1 259 aa11.09□□□□□ -0.63
SMAD3-208ENST00000558827 STEAP2Q8NFT2 490 aa11.09□□□□□ -0.63
SMAD3-208ENST00000558827 NFKBIDQ8NI38 313 aa11.09□□□□□ -0.63
SMAD3-208ENST00000558827 SLC25A43Q8WUT9 341 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-208ENST00000558827 NEUROG1Q92886 237 aa11.09□□□□□ -0.63
SMAD3-208ENST00000558827 KISS1RQ969F8 398 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-208ENST00000558827 TMUB1Q9BVT8 246 aa11.09□□□□□ -0.63
SMAD3-208ENST00000558827 BCO1Q9HAY6 547 aa11.09□□□□□ -0.63
SMAD3-208ENST00000558827 NPHS2Q9NP85 383 aa11.09□□□□□ -0.63
SMAD3-208ENST00000558827 FANCFQ9NPI8 374 aa11.09□□□□□ -0.63
SMAD3-208ENST00000558827 ARGLU1Q9NWB6 273 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-208ENST00000558827 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-208ENST00000558827 CHST2Q9Y4C5 530 aa11.09□□□□□ -0.63
SMAD3-208ENST00000558827 SPIN1Q9Y657 262 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-208ENST00000558827 A0A096LPI6 279 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 CDHR4A6H8M9 788 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 TMEM247A6NEH6 219 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 C5orf58C9J3I9 102 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 AKR7A3O95154 331 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 PSMB1P20618 241 aaKnown RBP11.08□□□□□ -0.64
SMAD3-208ENST00000558827 IGHV1-2P23083 117 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 CXCR1P25024 350 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 ADSLP30566 484 aaPredicted RBP11.08□□□□□ -0.64
SMAD3-208ENST00000558827 SLC1A3P43003 542 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 OR3A2P47893 321 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 PCYT1AP49585 367 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms