RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 ATP6V1C2Q8NEY4 427 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 VPS37AQ8NEZ2 397 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 OR8J2Q8NGG1 315 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 MIPOL1Q8TD10 442 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 SLC25A43Q8WUT9 341 aaPredicted RBP7.17□□□□□ -1.26
TRAF3-205ENST00000558700 TMEM234Q8WY98 164 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 TESCQ96BS2 214 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 PERPQ96FX8 193 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 PPP1R36Q96LQ0 422 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 Q96MF0 132 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 OR5B2Q96R09 309 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 SDF2Q99470 211 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 BDH2Q9BUT1 245 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 HDHD5Q9BXW7 423 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 DPY30Q9C005 99 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 SERHL2Q9H4I8 314 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 CXorf56Q9H5V9 222 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 NGBQ9NPG2 151 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 RAP2CQ9Y3L5 183 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 SPIN1Q9Y657 262 aaPredicted RBP7.17□□□□□ -1.26
TRAF3-205ENST00000558700 NSD1Q96L73 2696 aaPredicted RBP7.17□□□□□ -1.26
TRAF3-205ENST00000558700 ARID1AO14497 2285 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 NUP214P35658 2090 aaPredicted RBP7.16□□□□□ -1.26
TRAF3-205ENST00000558700 WDR91A4D1P6 747 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 E9PBE3 544 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 H7C1Q1 480 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 ANKRD28O15084 1053 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 ITM2AO43736 263 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 GCM2O75603 506 aaPredicted RBP7.16□□□□□ -1.26
TRAF3-205ENST00000558700 CYP7B1O75881 506 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 YES1P07947 543 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 UBTFL6P0CB48 400 aaPredicted RBP7.16□□□□□ -1.26
TRAF3-205ENST00000558700 LBPP18428 481 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 RAB6AP20340 208 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 ENPP1P22413 925 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 UQCRC2P22695 453 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 CHI3L1P36222 383 aaPredicted RBP7.16□□□□□ -1.26
TRAF3-205ENST00000558700 PTH2RP49190 550 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 RPL14P50914 215 aaKnown RBP7.16□□□□□ -1.26
TRAF3-205ENST00000558700 ANXA11P50995 505 aaKnown RBP7.16□□□□□ -1.26
TRAF3-205ENST00000558700 RAC3P60763 192 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 CSNK2A1P68400 391 aaPredicted RBP7.16□□□□□ -1.26
TRAF3-205ENST00000558700 P2RY6Q15077 328 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 TIGD2Q4W5G0 525 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 SAXO2Q658L1 398 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 HEPHL1Q6MZM0 1159 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 Q6ZT83 130 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 C22orf34Q6ZV56 151 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 EIF3MQ7L2H7 374 aaKnown RBP7.16□□□□□ -1.26
TRAF3-205ENST00000558700 SSX8Q7RTT4 187 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 NUFIP2Q7Z417 695 aaKnown RBP7.16□□□□□ -1.26
TRAF3-205ENST00000558700 CROCCP2Q86T23 111 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 GABRG1Q8N1C3 465 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 ZNF611Q8N823 705 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 FAM71CQ8NEG0 241 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 S100PBPQ96BU1 408 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 ZHX1-C8orf76Q96EF9 292 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 PSD2Q9BQI7 771 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 TMEM204Q9BSN7 226 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 THUMPD3Q9BV44 507 aaKnown RBP7.16□□□□□ -1.26
TRAF3-205ENST00000558700 LAT2Q9GZY6 243 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 OR51I1Q9H343 314 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 ESRP2Q9H6T0 727 aaKnown RBP7.16□□□□□ -1.26
TRAF3-205ENST00000558700 AKTIPQ9H8T0 292 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 BCO1Q9HAY6 547 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 SERINC1Q9NRX5 453 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 EMC3Q9P0I2 261 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 HAO1Q9UJM8 370 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 MKLN1Q9UL63 735 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 SLC35A3Q9Y2D2 325 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 WDR45Q9Y484 360 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 RNF115Q9Y4L5 304 aa7.16□□□□□ -1.26
TRAF3-205ENST00000558700 IGHV3-15A0A0B4J1V0 119 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 CENPVL1A0A0U1RR11 272 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 PRSS51A0A1B0GVH4 220 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 ZNF724A8MTY0 619 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 SMAD9O15198 467 aaKnown RBP7.15□□□□□ -1.26
TRAF3-205ENST00000558700 CLOCKO15516 846 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 DNPH1O43598 174 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 EFNA2O43921 213 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 CYTIPO60759 359 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 UGT2B17O75795 530 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 H6PDO95479 791 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 CPSF4O95639 269 aaKnown RBP7.15□□□□□ -1.26
TRAF3-205ENST00000558700 FESP07332 822 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 GUSBP08236 651 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 DHRS4L1P0CG22 281 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 OR12D1P0DN82 309 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 BGNP21810 368 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 OR3A2P47893 321 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 SLC1A6P48664 564 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 SESN3P58005 492 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 RPS4XP62701 263 aaKnown RBP7.15□□□□□ -1.26
TRAF3-205ENST00000558700 TXNL4AP83876 142 aaKnown RBP7.15□□□□□ -1.26
TRAF3-205ENST00000558700 LRRC74AQ0VAA2 488 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 RASGEF1BQ0VAM2 473 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 FUT5Q11128 374 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 MERTKQ12866 999 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 ITGADQ13349 1161 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 CAPRIN1Q14444 709 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms