RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 SLC26A7Q8TE54 656 aa11.08□□□□□ -0.64
SMAD3-205ENST00000558428 SLC25A43Q8WUT9 341 aaPredicted RBP11.08□□□□□ -0.64
SMAD3-205ENST00000558428 CPNE4Q96A23 557 aaPredicted RBP11.08□□□□□ -0.64
SMAD3-205ENST00000558428 SFXN3Q9BWM7 321 aa11.08□□□□□ -0.64
SMAD3-205ENST00000558428 SRXN1Q9BYN0 137 aa11.08□□□□□ -0.64
SMAD3-205ENST00000558428 RNF122Q9H9V4 155 aa11.08□□□□□ -0.64
SMAD3-205ENST00000558428 CHST11Q9NPF2 352 aa11.08□□□□□ -0.64
SMAD3-205ENST00000558428 CMTM6Q9NX76 183 aa11.08□□□□□ -0.64
SMAD3-205ENST00000558428 KLHL28Q9NXS3 571 aa11.08□□□□□ -0.64
SMAD3-205ENST00000558428 OSGIN1Q9UJX0 560 aa11.08□□□□□ -0.64
SMAD3-205ENST00000558428 AP3M1Q9Y2T2 418 aa11.08□□□□□ -0.64
SMAD3-205ENST00000558428 TMED7Q9Y3B3 224 aa11.08□□□□□ -0.64
SMAD3-205ENST00000558428 CRYBG3Q68DQ2 2970 aa11.08□□□□□ -0.64
SMAD3-205ENST00000558428 TMEM72A0PK05 275 aa11.07□□□□□ -0.64
SMAD3-205ENST00000558428 EEF1E1-BLOC1S5C9J1V9 151 aa11.07□□□□□ -0.64
SMAD3-205ENST00000558428 C19orf84I3L1E1 186 aa11.07□□□□□ -0.64
SMAD3-205ENST00000558428 EEF1E1O43324 174 aaKnown RBP11.07□□□□□ -0.64
SMAD3-205ENST00000558428 AQP8O94778 261 aa11.07□□□□□ -0.64
SMAD3-205ENST00000558428 IL18BPO95998 194 aa11.07□□□□□ -0.64
SMAD3-205ENST00000558428 SLC7A2P52569 658 aa11.07□□□□□ -0.64
SMAD3-205ENST00000558428 RGS8P57771 180 aaPredicted RBP11.07□□□□□ -0.64
SMAD3-205ENST00000558428 NCALDP61601 193 aa11.07□□□□□ -0.64
SMAD3-205ENST00000558428 VEZF1Q14119 521 aa11.07□□□□□ -0.64
SMAD3-205ENST00000558428 ZNF239Q16600 458 aaKnown RBP11.07□□□□□ -0.64
SMAD3-205ENST00000558428 DUSP7Q16829 419 aa11.07□□□□□ -0.64
SMAD3-205ENST00000558428 SP5Q6BEB4 398 aaPredicted RBP11.07□□□□□ -0.64
SMAD3-205ENST00000558428 CCDC80Q76M96 950 aa11.07□□□□□ -0.64
SMAD3-205ENST00000558428 SLC15A3Q8IY34 581 aa11.07□□□□□ -0.64
SMAD3-205ENST00000558428 CNEP1R1Q8N9A8 125 aa11.07□□□□□ -0.64
SMAD3-205ENST00000558428 CCDC197Q8NCU1 140 aa11.07□□□□□ -0.64
SMAD3-205ENST00000558428 OR2T12Q8NG77 320 aa11.07□□□□□ -0.64
SMAD3-205ENST00000558428 TAMM41Q96BW9 452 aa11.07□□□□□ -0.64
SMAD3-205ENST00000558428 ADAM19Q9H013 955 aa11.07□□□□□ -0.64
SMAD3-205ENST00000558428 RPS6KB2Q9UBS0 482 aa11.07□□□□□ -0.64
SMAD3-205ENST00000558428 TAGLN3Q9UI15 199 aa11.07□□□□□ -0.64
SMAD3-205ENST00000558428 PRDM4Q9UKN5 801 aa11.07□□□□□ -0.64
SMAD3-205ENST00000558428 CACNA1DQ01668 2161 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 A0A1W2PNV4 684 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 ELOVL7A1L3X0 281 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 NME4O00746 187 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 ZNF208O43345 1280 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 LGI1O95970 557 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 PLGP00747 810 aaPredicted RBP11.06□□□□□ -0.64
SMAD3-205ENST00000558428 CRHP06850 196 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 CXCR1P25024 350 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 FKBP2P26885 142 aaKnown RBP11.06□□□□□ -0.64
SMAD3-205ENST00000558428 KCNJ5P48544 419 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 DIO1P49895 249 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 RAC3P60763 192 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 PSME3P61289 254 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 SIRPAP78324 504 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 LIPEQ05469 1076 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 TFF3Q07654 80 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 FAM91A1Q658Y4 838 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 C8orf82Q6P1X6 216 aaPredicted RBP11.06□□□□□ -0.64
SMAD3-205ENST00000558428 TMPPEQ6ZT21 453 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 LSRQ86X29 649 aaPredicted RBP11.06□□□□□ -0.64
SMAD3-205ENST00000558428 MCEMP1Q8IX19 187 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 MICU2Q8IYU8 434 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 GPR32P1Q8NGA4 272 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 ROBO4Q8WZ75 1007 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 C3orf49Q96BT1 292 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 DDIT4LQ96D03 193 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 DNAJA3Q96EY1 480 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 ARL5BQ96KC2 179 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 OR11A1Q9GZK7 315 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 EVA1AQ9H8M9 152 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 ARL8BQ9NVJ2 186 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 GMPR2Q9P2T1 348 aaKnown RBP11.06□□□□□ -0.64
SMAD3-205ENST00000558428 TESQ9UGI8 421 aaKnown RBP11.06□□□□□ -0.64
SMAD3-205ENST00000558428 CLEC4AQ9UMR7 237 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 HDGFL3Q9Y3E1 203 aa11.06□□□□□ -0.64
SMAD3-205ENST00000558428 SETXQ7Z333 2677 aaKnown RBP11.05□□□□□ -0.64
SMAD3-205ENST00000558428 IGHV3-15A0A0B4J1V0 119 aa11.05□□□□□ -0.64
SMAD3-205ENST00000558428 M0R3H8 397 aa11.05□□□□□ -0.64
SMAD3-205ENST00000558428 SULT2B1O00204 365 aa11.05□□□□□ -0.64
SMAD3-205ENST00000558428 SYT5O00445 386 aa11.05□□□□□ -0.64
SMAD3-205ENST00000558428 NDUFAB1O14561 156 aa11.05□□□□□ -0.64
SMAD3-205ENST00000558428 TNFSF13O75888 250 aa11.05□□□□□ -0.64
SMAD3-205ENST00000558428 FESP07332 822 aa11.05□□□□□ -0.64
SMAD3-205ENST00000558428 C8BP07358 591 aa11.05□□□□□ -0.64
SMAD3-205ENST00000558428 CD247P20963 164 aa11.05□□□□□ -0.64
SMAD3-205ENST00000558428 ENPP1P22413 925 aa11.05□□□□□ -0.64
SMAD3-205ENST00000558428 HTR2AP28223 471 aa11.05□□□□□ -0.64
SMAD3-205ENST00000558428 KIR2DL2P43627 348 aaPredicted RBP11.05□□□□□ -0.64
SMAD3-205ENST00000558428 CLK1P49759 484 aaKnown RBP11.05□□□□□ -0.64
SMAD3-205ENST00000558428 ASCL1P50553 236 aa11.05□□□□□ -0.64
SMAD3-205ENST00000558428 MAP2K6P52564 334 aa11.05□□□□□ -0.64
SMAD3-205ENST00000558428 CRYBA2P53672 197 aa11.05□□□□□ -0.64
SMAD3-205ENST00000558428 CSNK2A1P68400 391 aaPredicted RBP11.05□□□□□ -0.64
SMAD3-205ENST00000558428 BNIP2Q12982 314 aa11.05□□□□□ -0.64
SMAD3-205ENST00000558428 MYBPHQ13203 477 aa11.05□□□□□ -0.64
SMAD3-205ENST00000558428 LRRC23Q53EV4 343 aaPredicted RBP11.05□□□□□ -0.64
SMAD3-205ENST00000558428 EEF1A1P5Q5VTE0 462 aa11.05□□□□□ -0.64
SMAD3-205ENST00000558428 GTF2IRD2BQ6EKJ0 949 aa11.05□□□□□ -0.64
SMAD3-205ENST00000558428 VWA1Q6PCB0 445 aa11.05□□□□□ -0.64
SMAD3-205ENST00000558428 FCRLAQ7L513 359 aa11.05□□□□□ -0.64
SMAD3-205ENST00000558428 GTF2IRD2Q86UP8 949 aa11.05□□□□□ -0.64
SMAD3-205ENST00000558428 RANBP3LQ86VV4 465 aaPredicted RBP11.05□□□□□ -0.64
SMAD3-205ENST00000558428 FITM2Q8N6M3 262 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms