RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 RFXAPO00287 272 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 RDH16O75452 317 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 HTR3BO95264 441 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 CD8AP01732 235 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 SBK2P0C263 348 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 PRG2P13727 222 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 ACHEP22303 614 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 CD52P31358 61 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 OR12D2P58182 307 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 PPP2CBP62714 309 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 PPP2CAP67775 309 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 CBFBQ13951 182 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 TMEM69Q5SWH9 247 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 UNQ9370/PRO34162Q6UXP9 181 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 USP53Q70EK8 1073 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 NRMQ8IXM6 262 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 MUC20Q8N307 709 aaPredicted RBP10.37□□□□□ -0.75
PCAT29-201ENST00000558411 OR13C5Q8NGS8 318 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 OR6N1Q8NGY5 312 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 OR5J2Q8NH18 312 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 C2CD4CQ8TF44 421 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 C2orf15Q8WU43 125 aaKnown RBP10.37□□□□□ -0.75
PCAT29-201ENST00000558411 TNFAIP8L1Q8WVP5 186 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 AUTS2Q8WXX7 1259 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 EDAQ92838 391 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 GCDHQ92947 438 aaPredicted RBP10.37□□□□□ -0.75
PCAT29-201ENST00000558411 TINAGL1Q9GZM7 467 aaPredicted RBP10.37□□□□□ -0.75
PCAT29-201ENST00000558411 AP5M1Q9H0R1 490 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 HAO2Q9NYQ3 351 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 TAS2R8Q9NYW2 309 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 MKL2Q9ULH7 1088 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 PCDHB10Q9UN67 800 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 Q9Y3F1 56 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 ZNF840PA6NDX5 716 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 ANTXRLA6NF34 631 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 C5orf52A6NGY3 159 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 LRRC72A6NJI9 287 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 MAN2B1O00754 1011 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 FMO6PO60774 539 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 VNN2O95498 520 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 IGHV2-70P01814 119 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 CALCBP10092 127 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 PRKAR1BP31321 381 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 PYCR1P32322 319 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 HCCSP53701 268 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 OC90Q02509 493 aaPredicted RBP10.37□□□□□ -0.75
PCAT29-201ENST00000558411 SRSF4Q08170 494 aaKnown RBP10.37□□□□□ -0.75
PCAT29-201ENST00000558411 FUT5Q11128 374 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 POU4F2Q12837 409 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 CDK5R1Q15078 307 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 FAM109BQ6ICB4 259 aaPredicted RBP10.37□□□□□ -0.75
PCAT29-201ENST00000558411 RPTNQ6XPR3 784 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 SLC16A13Q7RTY0 426 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 ZNF280BQ86YH2 543 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 TMEM151BQ8IW70 566 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 OR52L1Q8NGH7 329 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 HAVCR1Q96D42 359 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 DERL3Q96Q80 235 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 TEAD3Q99594 435 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 ADAM2Q99965 735 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 SEC11CQ9BY50 192 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 ZCCHC2Q9C0B9 1178 aaKnown RBP10.37□□□□□ -0.75
PCAT29-201ENST00000558411 ALX4Q9H161 411 aaPredicted RBP10.37□□□□□ -0.75
PCAT29-201ENST00000558411 ADGRL4Q9HBW9 690 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 NIT2Q9NQR4 276 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 PRDM9Q9NQV7 894 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 SLC22A11Q9NSA0 550 aa10.37□□□□□ -0.75
PCAT29-201ENST00000558411 TMEM272A0A1B0GTI8 110 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 ZC3H12DA2A288 527 aaKnown RBP10.36□□□□□ -0.75
PCAT29-201ENST00000558411 PMS2P1A4D2B8 440 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 FAM86C2PA6NEL3 165 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 TMEM202A6NGA9 273 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 PLPP1O14494 284 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 BHLHE40O14503 412 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 MTX2O75431 263 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 SLC25A4P12235 298 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 DDX6P26196 483 aaKnown RBP eCLIP10.36□□□□□ -0.75
PCAT29-201ENST00000558411 BDKRB2P30411 391 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 BLOC1S1P78537 153 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 BEX3Q00994 111 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 PDZK1IP1Q13113 114 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 NDUFAF6Q330K2 333 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 RNF212Q495C1 297 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 FCRLBQ6BAA4 426 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 H3F3CQ6NXT2 135 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 C11orf88Q6PI97 169 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 TMEM64Q6YI46 380 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 ZNF813Q6ZN06 617 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 SYT9Q86SS6 491 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 JAZF1Q86VZ6 243 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 NKAIN4Q8IVV8 208 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 SYS1Q8N2H4 156 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 LNX2Q8N448 690 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 OR2AP1Q8NGE2 309 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 OR1S2Q8NGQ3 325 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 C1orf216Q8TAB5 229 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 ZNF707Q96C28 371 aaPredicted RBP10.36□□□□□ -0.75
PCAT29-201ENST00000558411 BBS4Q96RK4 519 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 CPEB1Q9BZB8 566 aaKnown RBP10.36□□□□□ -0.75
PCAT29-201ENST00000558411 C1orf198Q9H425 327 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms