RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 SPEM1Q8N4L4 309 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 ZNRF4Q8WWF5 429 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 DPYSL5Q9BPU6 564 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 ZNF426Q9BUY5 554 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 MIXL1Q9H2W2 232 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 GMEB2Q9UKD1 530 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 ZNF346Q9UL40 294 aaKnown RBP9.69□□□□□ -0.86
TPM1-210ENST00000558264 V9GYH0 126 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 CEP192Q8TEP8 1941 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 H0YIG0 161 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 H3BMH7 237 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 WISP1O95388 367 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 GIMD1P0DJR0 217 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 ZNF3P17036 446 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 E2F1Q01094 437 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 SLC3A1Q07837 685 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 NSDHLQ15738 373 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 ZNF79Q15937 498 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 BAK1Q16611 211 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 TUBA3EQ6PEY2 450 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 C16orf47Q6ZP98 133 aaPredicted RBP9.68□□□□□ -0.86
TPM1-210ENST00000558264 ZNF550Q7Z398 422 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 LSMEM1Q8N8F7 131 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 DTX3Q8N9I9 347 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 NEIL3Q8TAT5 605 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 SLC2A12Q8TD20 617 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 C3orf49Q96BT1 292 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 RASD2Q96D21 266 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 MKKSQ9NPJ1 570 aaPredicted RBP9.68□□□□□ -0.86
TPM1-210ENST00000558264 CTSFQ9UBX1 484 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 MKL2Q9ULH7 1088 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 COLQQ9Y215 455 aaPredicted RBP9.68□□□□□ -0.86
TPM1-210ENST00000558264 SLC35A3Q9Y2D2 325 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 CMAHPQ9Y471 501 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 MPDZO75970 2070 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 A0A075B6Q4 140 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 FITM1A5D6W6 292 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 SAGE2PA6NJ88 616 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 BLOC1S5-TXNDC5H3BN57 136 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 J3QRE1 110 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 DUX1O43812 170 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 ICOSLGO75144 302 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 IL1AP01583 271 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 GRPRP30550 384 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 ACVR1BP36896 505 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 CXCL12P48061 93 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 OR12D2P58182 307 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 ERVK-25P63136 954 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 DAB2P98082 770 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 ARHGAP40Q5TG30 622 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 FAM131AQ6UXB0 335 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 RTL4Q6ZR62 310 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 UTS2BQ765I0 119 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 GPR135Q8IZ08 494 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 UBE2J2Q8N2K1 259 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 OR13C5Q8NGS8 318 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 MOSPD2Q8NHP6 518 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 SMPDL3BQ92485 455 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 SGTBQ96EQ0 304 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 C4orf36Q96KX1 117 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 NMNAT3Q96T66 252 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 NDC1Q9BTX1 674 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 NUDT9Q9BW91 350 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 PPIL3Q9H2H8 161 aaKnown RBP9.68□□□□□ -0.86
TPM1-210ENST00000558264 CHRDQ9H2X0 955 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 ADGRL4Q9HBW9 690 aa9.68□□□□□ -0.86
TPM1-210ENST00000558264 CPED1A4D0V7 1026 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 K7ESF4 209 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 GTPBP1O00178 669 aaKnown RBP9.67□□□□□ -0.86
TPM1-210ENST00000558264 PSMD9O00233 223 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 UTS2O95399 124 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 PEPDP12955 493 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 HK1P19367 917 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 FBLP22087 321 aaKnown RBP9.67□□□□□ -0.86
TPM1-210ENST00000558264 SLC6A6P31641 620 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 NR0B1P51843 470 aaKnown RBP9.67□□□□□ -0.86
TPM1-210ENST00000558264 SERTAD2Q14140 314 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 TMEM44Q2T9K0 475 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 KLHL26Q53HC5 615 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 TMEM91Q6ZNR0 172 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 GDPD3Q7L5L3 318 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 CELF2-AS1Q8N7Q2 184 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 ARIH2OSQ8N7S6 290 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 C17orf47Q8NEP4 570 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 ADAMTS18Q8TE60 1221 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 HPS1Q92902 700 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 DIRAS2Q96HU8 199 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 SHDQ96IW2 340 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 MOGAT1Q96PD6 335 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 DEPDC7Q96QD5 511 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 CDX2Q99626 313 aaPredicted RBP9.67□□□□□ -0.86
TPM1-210ENST00000558264 FGF21Q9NSA1 209 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 WNT16Q9UBV4 365 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 PRODH2Q9UF12 536 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 GSTK1Q9Y2Q3 226 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 ALPK2Q86TB3 2170 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 EML5Q05BV3 1969 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 IGKV1D-42A0A075B6H8 117 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 A0A087WUJ7 227 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 A0A1W2PPK0 400 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms